Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU75461 |
| length | 202 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G63696 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13135659 ~ 13135860 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75450 | lncRNA | upstream | 15982 | 13119468 ~ 13119677 (+) | True | G63685 |
| XR_004577946.1 | lncRNA | upstream | 208672 | 12922870 ~ 12926987 (+) | True | LOC117596991 |
| TU75285 | lncRNA | upstream | 301329 | 12801894 ~ 12834330 (+) | True | G63547 |
| XR_003404040.2 | lncRNA | upstream | 362837 | 12768585 ~ 12772822 (+) | True | LOC113540557 |
| TU75255 | lncRNA | upstream | 362856 | 12770726 ~ 12772803 (+) | False | LOC113540557 |
| TU75429 | lncRNA | downstream | 63147 | 13199007 ~ 13199862 (+) | True | G63666 |
| TU75479 | lncRNA | downstream | 78117 | 13213977 ~ 13219859 (+) | False | tmem88b |
| TU75440 | lncRNA | downstream | 123014 | 13258874 ~ 13266479 (+) | True | LOC117597082 |
| XR_004578006.1 | lncRNA | downstream | 123531 | 13259391 ~ 13267034 (+) | False | LOC117597082 |
| TU75438 | lncRNA | downstream | 140961 | 13276821 ~ 13277704 (+) | False | slc16a13 |
| XM_026936299.2 | mRNA | upstream | 20492 | 12980849 ~ 13115167 (+) | True | dnah2 |
| XM_026935904.2 | mRNA | upstream | 159222 | 12951069 ~ 12976437 (+) | True | serpinh2 |
| XM_026936981.2 | mRNA | upstream | 274442 | 12795941 ~ 12861217 (+) | True | efnb3b |
| XM_026937280.2 | mRNA | upstream | 347434 | 12777177 ~ 12788225 (+) | True | wrap53 |
| XM_026937160.2 | mRNA | upstream | 367755 | 12742257 ~ 12767904 (+) | True | gigyf1a |
| XM_034303610.1 | mRNA | downstream | 21588 | 13157448 ~ 13198549 (+) | False | kdm6ba |
| XM_026936937.2 | mRNA | downstream | 21588 | 13157448 ~ 13198549 (+) | False | kdm6ba |
| XM_026936936.2 | mRNA | downstream | 39935 | 13175795 ~ 13198549 (+) | False | kdm6ba |
| XM_026936939.2 | mRNA | downstream | 50310 | 13186170 ~ 13198549 (+) | False | kdm6ba |
| XM_026936249.2 | mRNA | downstream | 70797 | 13206657 ~ 13214043 (+) | True | tmem88b |
| TU74787 | other | upstream | 840536 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| XR_003403980.2 | other | upstream | 1438364 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU73719 | other | upstream | 2472252 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 2569935 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 2604131 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| TU75687 | other | downstream | 282517 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 334909 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 422763 | 13558623 ~ 13562266 (+) | True | cited1 |
| XR_004577999.1 | other | downstream | 569716 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_004578085.1 | other | downstream | 1119884 | 14255744 ~ 14269340 (+) | False | brms1 |
