Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303789.1 |
| length | 934 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC113539889 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13468552 ~ 13475037 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75682 | lncRNA | upstream | 826 | 13459362 ~ 13467726 (+) | True | G63898 |
| TU75685 | lncRNA | upstream | 51111 | 13417221 ~ 13417441 (+) | True | G63901 |
| TU75666 | lncRNA | upstream | 80598 | 13387598 ~ 13387954 (+) | True | G63889 |
| TU75437 | lncRNA | upstream | 182718 | 13284541 ~ 13285834 (+) | False | slc16a13 |
| TU75438 | lncRNA | upstream | 190848 | 13276821 ~ 13277704 (+) | False | slc16a13 |
| TU75739 | lncRNA | downstream | 29423 | 13504460 ~ 13504719 (+) | True | G63936 |
| TU75791 | lncRNA | downstream | 94965 | 13570002 ~ 13572833 (+) | True | G63976 |
| TU75783 | lncRNA | downstream | 220612 | 13695649 ~ 13748072 (+) | False | G63973 |
| TU75785 | lncRNA | downstream | 220612 | 13695649 ~ 13748072 (+) | True | G63973 |
| TU75843 | lncRNA | downstream | 280507 | 13755544 ~ 13759751 (+) | True | G64025 |
| XM_026937015.2 | mRNA | upstream | 17729 | 13443794 ~ 13450823 (+) | True | LOC113540489 |
| XM_034303680.1 | mRNA | upstream | 31956 | 13420533 ~ 13436596 (+) | True | acadvl |
| XM_026937145.2 | mRNA | upstream | 51691 | 13399435 ~ 13416861 (+) | True | dvl2 |
| XM_026935898.2 | mRNA | upstream | 74380 | 13391809 ~ 13394172 (+) | False | si:ch73-335l21.2 |
| XM_026936951.2 | mRNA | downstream | 11499 | 13486536 ~ 13500833 (+) | True | si:dkey-33c9.6 |
| XM_026936560.2 | mRNA | downstream | 58780 | 13533817 ~ 13553948 (+) | True | hdac8 |
| XM_026936562.2 | mRNA | downstream | 59117 | 13534154 ~ 13553948 (+) | False | hdac8 |
| XM_026936564.2 | mRNA | downstream | 83586 | 13558623 ~ 13561537 (+) | False | cited1 |
| XM_026936565.2 | mRNA | downstream | 84278 | 13559315 ~ 13561537 (+) | False | cited1 |
| TU75687 | other | upstream | 49856 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU74787 | other | upstream | 1173429 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| XR_003403980.2 | other | upstream | 1771257 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU73719 | other | upstream | 2805145 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 2902828 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| XR_003404009.2 | other | downstream | 83586 | 13558623 ~ 13562266 (+) | True | cited1 |
| XR_004577999.1 | other | downstream | 230539 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_004578085.1 | other | downstream | 780707 | 14255744 ~ 14269340 (+) | False | brms1 |
| XR_004578093.1 | other | downstream | 1156993 | 14632030 ~ 14658936 (+) | False | zgc:194930 |
| XR_003403994.2 | other | downstream | 2548158 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
