Item | Value |
---|---|
RNA id | TU76370 |
length | 203 |
lncRNA type | inter_gene |
GC content | 0.44 |
exon number | 1 |
gene id | G64462 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 14296270 ~ 14296472 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU76367 | lncRNA | upstream | 1009 | 14295002 ~ 14295261 (+) | True | G64459 |
TU76204 | lncRNA | upstream | 239383 | 14056527 ~ 14056887 (+) | True | G64308 |
TU75926 | lncRNA | upstream | 253856 | 14041968 ~ 14042414 (+) | True | G64095 |
TU75936 | lncRNA | upstream | 278601 | 14017286 ~ 14017669 (+) | True | G64105 |
TU75934 | lncRNA | upstream | 282852 | 14013219 ~ 14013418 (+) | True | G64103 |
TU76581 | lncRNA | downstream | 383734 | 14680206 ~ 14680813 (+) | True | G64668 |
TU76586 | lncRNA | downstream | 465863 | 14762335 ~ 14762596 (+) | True | G64673 |
XR_004578083.1 | lncRNA | downstream | 680854 | 14977326 ~ 15011493 (+) | True | LOC117597182 |
XR_004578084.1 | lncRNA | downstream | 680854 | 14977326 ~ 15011493 (+) | False | LOC117597182 |
TU76906 | lncRNA | downstream | 904837 | 15201309 ~ 15201528 (+) | True | G64963 |
XM_026937055.2 | mRNA | upstream | 26930 | 14255744 ~ 14269340 (+) | True | brms1 |
XM_034304046.1 | mRNA | upstream | 26930 | 14255744 ~ 14269340 (+) | False | brms1 |
XM_034303973.1 | mRNA | upstream | 42380 | 14229973 ~ 14253890 (+) | True | ppp1r14bb |
XM_026936979.2 | mRNA | upstream | 43658 | 14229982 ~ 14252612 (+) | False | ppp1r14bb |
XM_026937054.2 | mRNA | upstream | 144981 | 14092494 ~ 14151289 (+) | True | slc8a4b |
XM_026936436.2 | mRNA | downstream | 59576 | 14356048 ~ 14379551 (+) | True | LOC113540157 |
XM_026936433.2 | mRNA | downstream | 279925 | 14576397 ~ 14622524 (+) | True | LOC113540153 |
XM_026936434.2 | mRNA | downstream | 335588 | 14632060 ~ 14647239 (+) | False | zgc:194930 |
XM_034304076.1 | mRNA | downstream | 336259 | 14632731 ~ 14647239 (+) | False | zgc:194930 |
XM_034304075.1 | mRNA | downstream | 342018 | 14638490 ~ 14647240 (+) | True | zgc:194930 |
XR_004578085.1 | other | upstream | 26930 | 14255744 ~ 14269340 (+) | False | brms1 |
XR_004577999.1 | other | upstream | 576816 | 13705576 ~ 13719454 (+) | False | gc2 |
XR_003404009.2 | other | upstream | 734004 | 13558623 ~ 13562266 (+) | True | cited1 |
TU75730 | other | upstream | 821233 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
TU75687 | other | upstream | 877574 | 13418377 ~ 13418696 (+) | True | G63903 |
XR_004578093.1 | other | downstream | 335558 | 14632030 ~ 14658936 (+) | False | zgc:194930 |
XR_003403994.2 | other | downstream | 1726723 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
XR_004578074.1 | other | downstream | 2013741 | 16310213 ~ 16319166 (+) | False | LOC113539780 |
XR_003404046.2 | other | downstream | 2071484 | 16367956 ~ 16370684 (+) | False | LOC113540582 |
XR_003404110.1 | other | downstream | 2464047 | 16760519 ~ 16760583 (+) | True | LOC113540740 |