Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU77172 |
| length | 999 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G65199 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 16062088 ~ 16063461 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77152 | lncRNA | upstream | 6943 | 16019857 ~ 16055145 (+) | True | G65184 |
| TU77137 | lncRNA | upstream | 60627 | 16001155 ~ 16001461 (+) | True | G65170 |
| TU77079 | lncRNA | upstream | 191317 | 15869198 ~ 15870771 (+) | True | G65115 |
| XR_004578089.1 | lncRNA | upstream | 505164 | 15506292 ~ 15556924 (+) | True | LOC117597190 |
| TU76906 | lncRNA | upstream | 860560 | 15201309 ~ 15201528 (+) | True | G64963 |
| TU77337 | lncRNA | downstream | 159957 | 16223418 ~ 16231115 (+) | True | G65335 |
| TU77409 | lncRNA | downstream | 328668 | 16392129 ~ 16392363 (+) | True | G65382 |
| TU77422 | lncRNA | downstream | 367000 | 16430461 ~ 16430686 (+) | True | G65395 |
| TU77544 | lncRNA | downstream | 368484 | 16431945 ~ 16442900 (+) | True | G65495 |
| TU77609 | lncRNA | downstream | 451176 | 16514637 ~ 16514841 (+) | True | G65542 |
| XM_026936291.2 | mRNA | upstream | 11460 | 16040205 ~ 16050628 (+) | True | htra3b |
| XM_026936288.2 | mRNA | upstream | 22104 | 16023195 ~ 16039984 (+) | True | LOC113540079 |
| XM_034303656.1 | mRNA | upstream | 22104 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
| XM_026936290.2 | mRNA | upstream | 25704 | 16023194 ~ 16036384 (+) | False | LOC113540079 |
| XM_026936548.2 | mRNA | upstream | 61143 | 15992175 ~ 16000945 (+) | True | plaa |
| XM_026936832.2 | mRNA | downstream | 22216 | 16085677 ~ 16092460 (+) | True | ttc5 |
| XM_026936829.2 | mRNA | downstream | 35422 | 16098883 ~ 16107737 (+) | True | si:ch211-212k18.5 |
| XM_026936826.2 | mRNA | downstream | 35507 | 16098968 ~ 16107737 (+) | False | si:ch211-212k18.5 |
| XM_034303659.1 | mRNA | downstream | 45515 | 16108976 ~ 16118843 (+) | False | slc7a7 |
| XM_026936352.2 | mRNA | downstream | 45576 | 16109037 ~ 16120319 (+) | True | slc7a7 |
| XR_003403994.2 | other | upstream | 22104 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
| XR_004578093.1 | other | upstream | 1403152 | 14632030 ~ 14658936 (+) | False | zgc:194930 |
| XR_004578085.1 | other | upstream | 1792748 | 14255744 ~ 14269340 (+) | False | brms1 |
| XR_004577999.1 | other | upstream | 2342634 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_003404009.2 | other | upstream | 2499822 | 13558623 ~ 13562266 (+) | True | cited1 |
| XR_004578074.1 | other | downstream | 246752 | 16310213 ~ 16319166 (+) | False | LOC113539780 |
| XR_003404046.2 | other | downstream | 304495 | 16367956 ~ 16370684 (+) | False | LOC113540582 |
| XR_003404110.1 | other | downstream | 697058 | 16760519 ~ 16760583 (+) | True | LOC113540740 |
| XR_003404111.1 | other | downstream | 697288 | 16760749 ~ 16760819 (+) | True | LOC113540741 |
| XR_003404115.1 | other | downstream | 697520 | 16760981 ~ 16761107 (+) | True | LOC113540745 |
