Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU77455 |
| length | 1084 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G65422 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 16262925 ~ 16264165 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77449 | lncRNA | downstream | 2627 | 16255951 ~ 16260298 (-) | True | G65416 |
| XR_003404045.2 | lncRNA | downstream | 66329 | 16193092 ~ 16196596 (-) | True | LOC113540579 |
| TU77434 | lncRNA | downstream | 66459 | 16193092 ~ 16196466 (-) | False | LOC113540579 |
| TU77227 | lncRNA | downstream | 271409 | 15989549 ~ 15991516 (-) | True | smim20 |
| TU77256 | lncRNA | downstream | 280652 | 15981736 ~ 15982273 (-) | True | G65267 |
| TU77456 | lncRNA | upstream | 3071 | 16267236 ~ 16267546 (-) | True | G65423 |
| TU77478 | lncRNA | upstream | 35831 | 16299996 ~ 16300708 (-) | True | G65445 |
| TU77501 | lncRNA | upstream | 78899 | 16343064 ~ 16353271 (-) | True | G65463 |
| TU77520 | lncRNA | upstream | 103976 | 16368141 ~ 16368495 (-) | True | G65475 |
| TU77517 | lncRNA | upstream | 105367 | 16369532 ~ 16373147 (-) | True | G65472 |
| XM_026936696.2 | mRNA | downstream | 31785 | 16207837 ~ 16231140 (-) | False | znf638 |
| XM_026936695.2 | mRNA | downstream | 31785 | 16207837 ~ 16231140 (-) | True | znf638 |
| XM_026936100.2 | mRNA | downstream | 71356 | 16158387 ~ 16191569 (-) | True | LOC113539957 |
| XM_034303465.1 | mRNA | downstream | 120954 | 16140800 ~ 16141971 (-) | True | zgc:194655 |
| XM_026936353.2 | mRNA | downstream | 137915 | 16120382 ~ 16125010 (-) | True | oxa1l |
| XM_026935815.2 | mRNA | upstream | 57485 | 16321650 ~ 16326011 (-) | True | tmem179ba |
| XM_026935806.2 | mRNA | upstream | 63408 | 16327573 ~ 16332792 (-) | True | prox3 |
| XM_026936975.2 | mRNA | upstream | 72091 | 16336256 ~ 16342824 (-) | True | snx15 |
| XM_026936586.2 | mRNA | upstream | 154999 | 16419164 ~ 16426624 (-) | False | tnfsf12 |
| XM_026936587.2 | mRNA | upstream | 154999 | 16419164 ~ 16426623 (-) | False | tnfsf12 |
| XR_003404041.2 | other | downstream | 191233 | 16055022 ~ 16071692 (-) | False | acox3 |
| XR_004577994.1 | other | downstream | 271040 | 15973579 ~ 15991885 (-) | False | smim20 |
| XR_004578098.1 | other | downstream | 358570 | 15879471 ~ 15904355 (-) | False | tbc1d19 |
| trnap-ugg_2 | other | downstream | 387027 | 15875827 ~ 15875898 (-) | True | trnap-ugg_2 |
| trnae-cuc_13 | other | downstream | 1528198 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
| TU77497 | other | upstream | 155145 | 16419310 ~ 16423164 (-) | True | tnfsf12 |
| TU77801 | other | upstream | 339943 | 16604108 ~ 16605717 (-) | False | bmp15 |
| TU78232 | other | upstream | 1136429 | 17400594 ~ 17402464 (-) | True | G66053 |
| TU78241 | other | upstream | 1175328 | 17439493 ~ 17444174 (-) | False | rnaseka |
| TU78578 | other | upstream | 1330284 | 17594449 ~ 17634868 (-) | True | G66281 |
