Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU78431 |
| length | 459 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G66179 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 17772553 ~ 17775309 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko05140 | Leishmaniasis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU78387 | lncRNA | upstream | 25388 | 17740075 ~ 17747165 (+) | True | G66159 |
| TU78379 | lncRNA | upstream | 69098 | 17703234 ~ 17703455 (+) | True | G66151 |
| TU78365 | lncRNA | upstream | 120843 | 17649365 ~ 17651710 (+) | True | G66144 |
| TU78338 | lncRNA | upstream | 137686 | 17593858 ~ 17634867 (+) | False | G66128 |
| TU78468 | lncRNA | downstream | 98090 | 17873399 ~ 17877074 (+) | True | G66214 |
| TU78405 | lncRNA | downstream | 129302 | 17904611 ~ 17919097 (+) | True | G66169 |
| TU78403 | lncRNA | downstream | 136285 | 17911594 ~ 17919097 (+) | False | G66169 |
| TU78438 | lncRNA | downstream | 198689 | 17973998 ~ 17975359 (+) | True | G66186 |
| TU78493 | lncRNA | downstream | 215126 | 17990435 ~ 17992247 (+) | True | G66237 |
| XM_026936031.2 | mRNA | upstream | 46144 | 17722149 ~ 17726409 (+) | True | vgf |
| XM_026936079.2 | mRNA | upstream | 70230 | 17700478 ~ 17702323 (+) | True | LOC113539938 |
| XM_026936056.2 | mRNA | upstream | 74282 | 17694648 ~ 17698271 (+) | True | LOC113539928 |
| XM_026936057.2 | mRNA | upstream | 74282 | 17694648 ~ 17698271 (+) | False | LOC113539928 |
| XM_026936067.2 | mRNA | upstream | 91067 | 17673550 ~ 17681486 (+) | True | si:ch211-196f2.6 |
| XM_034303838.1 | mRNA | downstream | 9681 | 17784990 ~ 17826526 (+) | True | zanl |
| XM_026936049.2 | mRNA | downstream | 114174 | 17889483 ~ 17893961 (+) | True | LOC113539925 |
| XM_026936051.2 | mRNA | downstream | 114218 | 17889527 ~ 17893960 (+) | False | LOC113539925 |
| XM_026936052.2 | mRNA | downstream | 114218 | 17889527 ~ 17893960 (+) | False | LOC113539925 |
| XM_026937074.2 | mRNA | downstream | 119591 | 17894900 ~ 17899493 (+) | True | mpdu1b |
| trnat-agu | other | upstream | 8019 | 17764461 ~ 17764534 (+) | True | trnat-agu |
| TU78354 | other | upstream | 152474 | 17609704 ~ 17620079 (+) | True | LOC113539940 |
| XR_003404112.1 | other | upstream | 1010678 | 16761804 ~ 16761875 (+) | True | LOC113540742 |
| XR_003404114.1 | other | upstream | 1010906 | 16761572 ~ 16761647 (+) | True | LOC113540744 |
| XR_003404113.1 | other | upstream | 1011215 | 16761266 ~ 16761338 (+) | True | LOC113540743 |
| XR_003403977.2 | other | downstream | 224849 | 18000158 ~ 18010962 (+) | False | ctdnep1b |
| XR_004577948.1 | other | downstream | 338135 | 18113444 ~ 18130505 (+) | False | frem1a |
| TU78855 | other | downstream | 422003 | 18197312 ~ 18208564 (+) | True | G66492 |
| TU79253 | other | downstream | 1081147 | 18856456 ~ 18858652 (+) | True | G66864 |
| trnah-gug_4 | other | downstream | 2053002 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
