Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU78438 |
| length | 859 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G66186 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 17973998 ~ 17975359 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU78405 | lncRNA | upstream | 54901 | 17904611 ~ 17919097 (+) | True | G66169 |
| TU78403 | lncRNA | upstream | 54901 | 17911594 ~ 17919097 (+) | False | G66169 |
| TU78468 | lncRNA | upstream | 96924 | 17873399 ~ 17877074 (+) | True | G66214 |
| TU78431 | lncRNA | upstream | 198689 | 17772553 ~ 17775309 (+) | True | G66179 |
| TU78387 | lncRNA | upstream | 226833 | 17740075 ~ 17747165 (+) | True | G66159 |
| TU78493 | lncRNA | downstream | 15076 | 17990435 ~ 17992247 (+) | True | G66237 |
| TU78533 | lncRNA | downstream | 116229 | 18091588 ~ 18096583 (+) | True | G66263 |
| TU78778 | lncRNA | downstream | 136326 | 18111685 ~ 18111915 (+) | True | G66426 |
| TU78810 | lncRNA | downstream | 201875 | 18177234 ~ 18177642 (+) | True | G66452 |
| TU79006 | lncRNA | downstream | 406597 | 18381956 ~ 18382162 (+) | True | G66637 |
| XM_026936445.2 | mRNA | upstream | 5687 | 17966324 ~ 17968311 (+) | True | LOC113540162 |
| XM_026936444.2 | mRNA | upstream | 23610 | 17936846 ~ 17950388 (+) | True | tnk1 |
| XM_026937074.2 | mRNA | upstream | 74505 | 17894900 ~ 17899493 (+) | True | mpdu1b |
| XM_026936049.2 | mRNA | upstream | 80037 | 17889483 ~ 17893961 (+) | True | LOC113539925 |
| XM_026936051.2 | mRNA | upstream | 80038 | 17889527 ~ 17893960 (+) | False | LOC113539925 |
| XM_026935857.2 | mRNA | downstream | 17281 | 17992640 ~ 17998216 (+) | True | elp5 |
| XM_026935856.2 | mRNA | downstream | 24799 | 18000158 ~ 18010962 (+) | True | ctdnep1b |
| XM_026937096.2 | mRNA | downstream | 39770 | 18015129 ~ 18019079 (+) | True | gabarapb |
| XM_026936730.2 | mRNA | downstream | 44852 | 18020211 ~ 18028051 (+) | False | spata6l |
| XM_026936735.2 | mRNA | downstream | 44852 | 18020211 ~ 18026457 (+) | False | spata6l |
| trnat-agu | other | upstream | 209464 | 17764461 ~ 17764534 (+) | True | trnat-agu |
| TU78354 | other | upstream | 353919 | 17609704 ~ 17620079 (+) | True | LOC113539940 |
| XR_003404112.1 | other | upstream | 1212123 | 16761804 ~ 16761875 (+) | True | LOC113540742 |
| XR_003404114.1 | other | upstream | 1212351 | 16761572 ~ 16761647 (+) | True | LOC113540744 |
| XR_003404113.1 | other | upstream | 1212660 | 16761266 ~ 16761338 (+) | True | LOC113540743 |
| XR_003403977.2 | other | downstream | 24799 | 18000158 ~ 18010962 (+) | False | ctdnep1b |
| XR_004577948.1 | other | downstream | 138085 | 18113444 ~ 18130505 (+) | False | frem1a |
| TU78855 | other | downstream | 221953 | 18197312 ~ 18208564 (+) | True | G66492 |
| TU79253 | other | downstream | 881097 | 18856456 ~ 18858652 (+) | True | G66864 |
| trnah-gug_4 | other | downstream | 1852952 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
