Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU78553 |
| length | 269 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G66274 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 17571331 ~ 17637986 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403988.2 | lncRNA | downstream | 121070 | 17446761 ~ 17453705 (-) | True | LOC113539942 |
| TU78235 | lncRNA | downstream | 170960 | 17402622 ~ 17403815 (-) | True | G66056 |
| TU78204 | lncRNA | downstream | 263715 | 17310387 ~ 17311060 (-) | True | G66028 |
| TU78151 | lncRNA | downstream | 265691 | 17254830 ~ 17309084 (-) | True | G65984 |
| XR_004578115.1 | lncRNA | downstream | 479619 | 17080215 ~ 17095156 (-) | False | LOC117597208 |
| XR_004577990.1 | lncRNA | upstream | 16533 | 17591839 ~ 17592470 (-) | True | LOC117597047 |
| TU78569 | lncRNA | upstream | 16536 | 17591842 ~ 17592247 (-) | False | LOC117597047 |
| TU78577 | lncRNA | upstream | 18442 | 17593748 ~ 17634868 (-) | False | G66281 |
| TU78579 | lncRNA | upstream | 18442 | 17593748 ~ 17634868 (-) | False | G66281 |
| TU78612 | lncRNA | upstream | 110715 | 17686021 ~ 17686234 (-) | True | G66310 |
| XM_026936033.2 | mRNA | downstream | 21635 | 17540590 ~ 17553140 (-) | False | ache |
| XM_026936034.2 | mRNA | downstream | 21635 | 17540590 ~ 17553140 (-) | True | ache |
| XM_026936035.2 | mRNA | downstream | 21888 | 17540590 ~ 17552887 (-) | False | ache |
| XM_026936075.2 | mRNA | downstream | 38002 | 17533165 ~ 17536773 (-) | False | zgc:92664 |
| XM_026936044.2 | mRNA | upstream | 72924 | 17648230 ~ 17651920 (-) | True | LOC113539922 |
| XM_026936045.2 | mRNA | upstream | 72924 | 17648230 ~ 17651093 (-) | False | LOC113539922 |
| XM_026936078.2 | mRNA | upstream | 162470 | 17737776 ~ 17747135 (-) | True | ap1s1 |
| XM_026936055.2 | mRNA | upstream | 172649 | 17747955 ~ 17751639 (-) | True | serpine1 |
| XM_026936054.2 | mRNA | upstream | 172649 | 17747955 ~ 17751619 (-) | False | serpine1 |
| TU78241 | other | downstream | 130601 | 17439493 ~ 17444174 (-) | False | rnaseka |
| TU78232 | other | downstream | 172311 | 17400594 ~ 17402464 (-) | True | G66053 |
| TU77801 | other | downstream | 969058 | 16604108 ~ 16605717 (-) | False | bmp15 |
| TU77497 | other | downstream | 1151611 | 16419310 ~ 16423164 (-) | True | tnfsf12 |
| XR_003404041.2 | other | downstream | 1503083 | 16055022 ~ 16071692 (-) | False | acox3 |
| TU78578 | other | upstream | 19143 | 17594449 ~ 17634868 (-) | True | G66281 |
| trnas-uga | other | upstream | 195844 | 17771150 ~ 17771231 (-) | True | trnas-uga |
| TU78662 | other | upstream | 216920 | 17792226 ~ 17830126 (-) | False | map11 |
| XR_003404075.1 | other | upstream | 340324 | 17915630 ~ 17915771 (-) | True | LOC113540701 |
| XR_003404117.1 | other | upstream | 1441517 | 19016823 ~ 19016953 (-) | True | LOC113540749 |
