Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU79649 |
| length | 992 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G67209 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 19382553 ~ 19451392 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU79647 | lncRNA | upstream | 6833 | 19373556 ~ 19375720 (+) | True | G67208 |
| TU79640 | lncRNA | upstream | 30649 | 19345844 ~ 19351904 (+) | True | G67205 |
| TU79644 | lncRNA | upstream | 30649 | 19345844 ~ 19351904 (+) | False | G67205 |
| TU79518 | lncRNA | upstream | 259929 | 19120859 ~ 19122624 (+) | True | LOC113540244 |
| XR_003404012.2 | lncRNA | upstream | 260533 | 19120838 ~ 19122020 (+) | False | LOC113540244 |
| TU79674 | lncRNA | downstream | 23103 | 19474495 ~ 19475474 (+) | True | G67227 |
| TU79687 | lncRNA | downstream | 47817 | 19499209 ~ 19501228 (+) | True | G67236 |
| TU79722 | lncRNA | downstream | 92654 | 19544046 ~ 19641619 (+) | True | G67262 |
| TU79734 | lncRNA | downstream | 167290 | 19618682 ~ 19621531 (+) | True | G67271 |
| TU79757 | lncRNA | downstream | 292248 | 19743640 ~ 19750374 (+) | False | G67291 |
| XM_026936566.2 | mRNA | upstream | 9798 | 19354380 ~ 19372755 (+) | True | trmt44 |
| XM_026937227.2 | mRNA | upstream | 43846 | 19328031 ~ 19338707 (+) | True | etnppl |
| XM_026937170.2 | mRNA | upstream | 59678 | 19170699 ~ 19322875 (+) | False | LOC113540597 |
| XM_034303433.1 | mRNA | downstream | 3634 | 19455026 ~ 19470962 (+) | True | LOC113540575 |
| XM_026936525.2 | mRNA | downstream | 29663 | 19481055 ~ 19485146 (+) | True | LOC113540207 |
| XM_026936526.2 | mRNA | downstream | 29663 | 19481055 ~ 19485146 (+) | False | LOC113540207 |
| XM_026936523.2 | mRNA | downstream | 29663 | 19481055 ~ 19484110 (+) | False | LOC113540207 |
| XM_034303403.1 | mRNA | downstream | 200505 | 19651897 ~ 19694516 (+) | True | LOC113539894 |
| TU79253 | other | upstream | 523901 | 18856456 ~ 18858652 (+) | True | G66864 |
| TU78855 | other | upstream | 1173989 | 18197312 ~ 18208564 (+) | True | G66492 |
| XR_004577948.1 | other | upstream | 1252048 | 18113444 ~ 18130505 (+) | False | frem1a |
| XR_003403977.2 | other | upstream | 1371591 | 18000158 ~ 18010962 (+) | False | ctdnep1b |
| trnat-agu | other | upstream | 1618019 | 17764461 ~ 17764534 (+) | True | trnat-agu |
| trnah-gug_4 | other | downstream | 376919 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| trnah-gug_5 | other | downstream | 377427 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnar-ucu_2 | other | downstream | 649633 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| TU80337 | other | downstream | 696403 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnaa-cgc | other | downstream | 901022 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
