Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80111 |
| length | 435 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G67595 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 19916600 ~ 19917169 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80110 | lncRNA | upstream | 2197 | 19911739 ~ 19914403 (+) | True | G67594 |
| TU80087 | lncRNA | upstream | 27875 | 19888178 ~ 19888725 (+) | True | G67582 |
| TU80083 | lncRNA | upstream | 34861 | 19879978 ~ 19881739 (+) | True | G67579 |
| XR_004577989.1 | lncRNA | upstream | 92341 | 19821178 ~ 19824259 (+) | True | LOC117597044 |
| TU79753 | lncRNA | upstream | 93752 | 19811964 ~ 19822848 (+) | True | G67287 |
| TU80167 | lncRNA | downstream | 45430 | 19962599 ~ 19965888 (+) | True | G67642 |
| TU80168 | lncRNA | downstream | 45430 | 19962599 ~ 19965086 (+) | False | G67642 |
| TU80206 | lncRNA | downstream | 148861 | 20066030 ~ 20067165 (+) | False | dock11 |
| TU80207 | lncRNA | downstream | 148861 | 20066030 ~ 20067038 (+) | False | dock11 |
| TU80393 | lncRNA | downstream | 332889 | 20250058 ~ 20275675 (+) | True | G67827 |
| XM_026936965.2 | mRNA | upstream | 29899 | 19881928 ~ 19886701 (+) | True | slx1b |
| XM_026935817.2 | mRNA | upstream | 44451 | 19867151 ~ 19872149 (+) | True | LOC113539773 |
| XM_034303403.1 | mRNA | upstream | 222084 | 19651897 ~ 19694516 (+) | True | LOC113539894 |
| XM_026936526.2 | mRNA | upstream | 431454 | 19481055 ~ 19485146 (+) | False | LOC113540207 |
| XM_026937193.2 | mRNA | downstream | 26571 | 19943740 ~ 19953223 (+) | True | si:ch73-71d17.2 |
| XM_026937262.2 | mRNA | downstream | 54142 | 19971311 ~ 19983277 (+) | True | ntn4 |
| XM_026937321.2 | mRNA | downstream | 73515 | 19990684 ~ 20067220 (+) | True | dock11 |
| XM_034303517.1 | mRNA | downstream | 73515 | 19990684 ~ 20067220 (+) | False | dock11 |
| XM_026937322.2 | mRNA | downstream | 73515 | 19990684 ~ 20067220 (+) | False | dock11 |
| trnah-gug_5 | other | upstream | 87710 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 88218 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU79253 | other | upstream | 1057948 | 18856456 ~ 18858652 (+) | True | G66864 |
| TU78855 | other | upstream | 1708036 | 18197312 ~ 18208564 (+) | True | G66492 |
| XR_004577948.1 | other | upstream | 1786095 | 18113444 ~ 18130505 (+) | False | frem1a |
| trnar-ucu_2 | other | downstream | 183856 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| TU80337 | other | downstream | 230626 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnaa-cgc | other | downstream | 435245 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80896 | other | downstream | 1103089 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 1410177 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
