Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80207 |
| length | 1009 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | dock11 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 19990684 ~ 20067220 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80167 | lncRNA | upstream | 100142 | 19962599 ~ 19965888 (+) | True | G67642 |
| TU80168 | lncRNA | upstream | 100944 | 19962599 ~ 19965086 (+) | False | G67642 |
| TU80111 | lncRNA | upstream | 148861 | 19916600 ~ 19917169 (+) | True | G67595 |
| TU80110 | lncRNA | upstream | 151627 | 19911739 ~ 19914403 (+) | True | G67594 |
| TU80087 | lncRNA | upstream | 177305 | 19888178 ~ 19888725 (+) | True | G67582 |
| TU80393 | lncRNA | downstream | 183020 | 20250058 ~ 20275675 (+) | True | G67827 |
| TU80554 | lncRNA | downstream | 413562 | 20480600 ~ 20481755 (+) | True | G67958 |
| TU80678 | lncRNA | downstream | 568310 | 20635348 ~ 20635565 (+) | True | G68054 |
| TU80695 | lncRNA | downstream | 625225 | 20692263 ~ 20693053 (+) | False | G68070 |
| TU80696 | lncRNA | downstream | 625225 | 20692263 ~ 20693111 (+) | True | G68070 |
| XM_026937323.2 | mRNA | upstream | 338 | 19990684 ~ 20065692 (+) | False | dock11 |
| XM_026937262.2 | mRNA | upstream | 82753 | 19971311 ~ 19983277 (+) | True | ntn4 |
| XM_026937193.2 | mRNA | upstream | 112807 | 19943740 ~ 19953223 (+) | True | si:ch73-71d17.2 |
| XM_026936965.2 | mRNA | upstream | 179329 | 19881928 ~ 19886701 (+) | True | slx1b |
| XM_026935817.2 | mRNA | upstream | 193881 | 19867151 ~ 19872149 (+) | True | LOC113539773 |
| XM_026936959.2 | mRNA | downstream | 2023 | 20069061 ~ 20075035 (+) | True | LOC113540455 |
| XM_026936960.2 | mRNA | downstream | 14732 | 20081770 ~ 20087305 (+) | True | LOC113540456 |
| XM_026935895.2 | mRNA | downstream | 24849 | 20091887 ~ 20099077 (+) | True | LOC113539830 |
| XM_026937098.2 | mRNA | downstream | 35443 | 20102481 ~ 20129464 (+) | True | kirrel1a |
| XM_026937099.2 | mRNA | downstream | 35444 | 20102482 ~ 20129464 (+) | False | kirrel1a |
| trnah-gug_5 | other | upstream | 237140 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 237648 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU79253 | other | upstream | 1207378 | 18856456 ~ 18858652 (+) | True | G66864 |
| TU78855 | other | upstream | 1857466 | 18197312 ~ 18208564 (+) | True | G66492 |
| XR_004577948.1 | other | upstream | 1935525 | 18113444 ~ 18130505 (+) | False | frem1a |
| trnar-ucu_2 | other | downstream | 33987 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| TU80337 | other | downstream | 80757 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnaa-cgc | other | downstream | 285376 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80896 | other | downstream | 953220 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 1260308 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
