Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80393 |
| length | 293 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G67827 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 20250058 ~ 20275675 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80206 | lncRNA | upstream | 182893 | 20066030 ~ 20067165 (+) | False | dock11 |
| TU80207 | lncRNA | upstream | 183020 | 20066030 ~ 20067038 (+) | False | dock11 |
| TU80167 | lncRNA | upstream | 284170 | 19962599 ~ 19965888 (+) | True | G67642 |
| TU80168 | lncRNA | upstream | 284972 | 19962599 ~ 19965086 (+) | False | G67642 |
| TU80111 | lncRNA | upstream | 332889 | 19916600 ~ 19917169 (+) | True | G67595 |
| TU80554 | lncRNA | downstream | 204925 | 20480600 ~ 20481755 (+) | True | G67958 |
| TU80678 | lncRNA | downstream | 359673 | 20635348 ~ 20635565 (+) | True | G68054 |
| TU80695 | lncRNA | downstream | 416588 | 20692263 ~ 20693053 (+) | False | G68070 |
| TU80696 | lncRNA | downstream | 416588 | 20692263 ~ 20693111 (+) | True | G68070 |
| TU80850 | lncRNA | downstream | 589203 | 20864878 ~ 20895955 (+) | True | G68192 |
| XM_034303348.1 | mRNA | upstream | 83809 | 20159312 ~ 20166249 (+) | False | hacd4 |
| XM_026936479.2 | mRNA | upstream | 83809 | 20159320 ~ 20166249 (+) | True | hacd4 |
| XM_026936481.2 | mRNA | upstream | 83809 | 20159613 ~ 20166249 (+) | False | hacd4 |
| XM_034303347.1 | mRNA | upstream | 83809 | 20159743 ~ 20166249 (+) | False | hacd4 |
| XM_026935939.2 | mRNA | upstream | 95281 | 20147824 ~ 20154777 (+) | True | fcer1g |
| XM_026936145.2 | mRNA | downstream | 14122 | 20289797 ~ 20297146 (+) | True | c4h4orf54 |
| XM_026936923.2 | mRNA | downstream | 31455 | 20307130 ~ 20314066 (+) | True | trmt10a |
| XM_026936924.2 | mRNA | downstream | 31594 | 20307269 ~ 20314066 (+) | False | trmt10a |
| XM_026936084.2 | mRNA | downstream | 42762 | 20318437 ~ 20332200 (+) | True | nectin4a |
| XM_026937181.2 | mRNA | downstream | 58003 | 20333678 ~ 20345681 (+) | False | coro1b |
| TU80337 | other | upstream | 95287 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnar-ucu_2 | other | upstream | 148960 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| trnah-gug_5 | other | upstream | 421168 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 421676 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU79253 | other | upstream | 1391406 | 18856456 ~ 18858652 (+) | True | G66864 |
| trnaa-cgc | other | downstream | 76739 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80896 | other | downstream | 744583 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 1051671 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| XR_004577949.1 | other | downstream | 1353401 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | downstream | 1353401 | 21629076 ~ 21639890 (+) | False | mettl4 |
