Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80554 |
| length | 1156 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G67958 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 20480600 ~ 20481755 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80393 | lncRNA | upstream | 204925 | 20250058 ~ 20275675 (+) | True | G67827 |
| TU80206 | lncRNA | upstream | 413435 | 20066030 ~ 20067165 (+) | False | dock11 |
| TU80207 | lncRNA | upstream | 413562 | 20066030 ~ 20067038 (+) | False | dock11 |
| TU80167 | lncRNA | upstream | 514712 | 19962599 ~ 19965888 (+) | True | G67642 |
| TU80168 | lncRNA | upstream | 515514 | 19962599 ~ 19965086 (+) | False | G67642 |
| TU80678 | lncRNA | downstream | 153593 | 20635348 ~ 20635565 (+) | True | G68054 |
| TU80695 | lncRNA | downstream | 210508 | 20692263 ~ 20693053 (+) | False | G68070 |
| TU80696 | lncRNA | downstream | 210508 | 20692263 ~ 20693111 (+) | True | G68070 |
| TU80850 | lncRNA | downstream | 383123 | 20864878 ~ 20895955 (+) | True | G68192 |
| TU80969 | lncRNA | downstream | 706776 | 21188531 ~ 21189134 (+) | True | G68299 |
| XM_026937239.2 | mRNA | upstream | 803 | 20458841 ~ 20479797 (+) | True | rtn3 |
| XM_026937240.2 | mRNA | upstream | 803 | 20458912 ~ 20479797 (+) | False | rtn3 |
| XM_026937241.2 | mRNA | upstream | 803 | 20458920 ~ 20479797 (+) | False | rtn3 |
| XM_026936845.2 | mRNA | upstream | 68944 | 20378775 ~ 20411656 (+) | True | rgs12a |
| XM_026936848.2 | mRNA | upstream | 68944 | 20378775 ~ 20411656 (+) | False | rgs12a |
| XM_026936377.2 | mRNA | downstream | 3889 | 20485644 ~ 20496755 (+) | True | si:dkey-28a3.2 |
| XM_026937249.2 | mRNA | downstream | 23009 | 20504764 ~ 20544748 (+) | False | eml3 |
| XM_026937251.2 | mRNA | downstream | 23009 | 20504764 ~ 20544748 (+) | False | eml3 |
| XM_026937250.2 | mRNA | downstream | 23009 | 20504764 ~ 20544748 (+) | False | eml3 |
| XM_026937252.2 | mRNA | downstream | 23009 | 20504764 ~ 20544748 (+) | False | eml3 |
| trnaa-cgc | other | upstream | 128115 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80337 | other | upstream | 325829 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnar-ucu_2 | other | upstream | 379502 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| trnah-gug_5 | other | upstream | 651710 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 652218 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU80896 | other | downstream | 538503 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 845591 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| XR_004577949.1 | other | downstream | 1147321 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | downstream | 1147321 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_004578015.1 | other | downstream | 1270661 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
