Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80696 |
| length | 849 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G68070 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 20692263 ~ 20693111 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80678 | lncRNA | upstream | 56698 | 20635348 ~ 20635565 (+) | True | G68054 |
| TU80554 | lncRNA | upstream | 210508 | 20480600 ~ 20481755 (+) | True | G67958 |
| TU80393 | lncRNA | upstream | 416588 | 20250058 ~ 20275675 (+) | True | G67827 |
| TU80206 | lncRNA | upstream | 625098 | 20066030 ~ 20067165 (+) | False | dock11 |
| TU80850 | lncRNA | downstream | 171767 | 20864878 ~ 20895955 (+) | True | G68192 |
| TU80969 | lncRNA | downstream | 495420 | 21188531 ~ 21189134 (+) | True | G68299 |
| TU80981 | lncRNA | downstream | 512634 | 21205745 ~ 21209324 (+) | True | G68304 |
| TU80993 | lncRNA | downstream | 540914 | 21234025 ~ 21234258 (+) | True | G68313 |
| TU81190 | lncRNA | downstream | 623144 | 21316255 ~ 21316515 (+) | True | G68435 |
| XM_026937147.2 | mRNA | upstream | 41 | 20682708 ~ 20692222 (+) | True | rce1a |
| XM_026937148.2 | mRNA | upstream | 4498 | 20682708 ~ 20687765 (+) | False | rce1a |
| XM_026936344.2 | mRNA | upstream | 31708 | 20652575 ~ 20660555 (+) | True | rab1ba |
| XM_026935854.2 | mRNA | upstream | 43077 | 20637228 ~ 20649186 (+) | True | si:ch73-40a2.1 |
| XM_034304144.1 | mRNA | upstream | 61277 | 20587613 ~ 20630986 (+) | False | ehbp1l1a |
| XM_026937256.2 | mRNA | downstream | 42716 | 20735827 ~ 20739174 (+) | True | cd248a |
| XM_026937340.2 | mRNA | downstream | 150233 | 20843344 ~ 20846978 (+) | True | LOC113540687 |
| XM_026936148.2 | mRNA | downstream | 159633 | 20852744 ~ 20893531 (+) | False | pde5ab |
| XM_026936149.2 | mRNA | downstream | 169327 | 20862438 ~ 20893531 (+) | False | pde5ab |
| XM_026936146.2 | mRNA | downstream | 172155 | 20865266 ~ 20893531 (+) | True | pde5ab |
| trnaa-cgc | other | upstream | 339778 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80337 | other | upstream | 537492 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnar-ucu_2 | other | upstream | 591165 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| trnah-gug_5 | other | upstream | 863373 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 863881 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU80896 | other | downstream | 327147 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 634235 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| XR_004577949.1 | other | downstream | 935965 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | downstream | 935965 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_004578015.1 | other | downstream | 1059305 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
