Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU80850 |
| length | 507 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G68192 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 20864878 ~ 20895955 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80696 | lncRNA | upstream | 171767 | 20692263 ~ 20693111 (+) | True | G68070 |
| TU80695 | lncRNA | upstream | 171825 | 20692263 ~ 20693053 (+) | False | G68070 |
| TU80678 | lncRNA | upstream | 229313 | 20635348 ~ 20635565 (+) | True | G68054 |
| TU80554 | lncRNA | upstream | 383123 | 20480600 ~ 20481755 (+) | True | G67958 |
| TU80393 | lncRNA | upstream | 589203 | 20250058 ~ 20275675 (+) | True | G67827 |
| TU80969 | lncRNA | downstream | 292576 | 21188531 ~ 21189134 (+) | True | G68299 |
| TU80981 | lncRNA | downstream | 309790 | 21205745 ~ 21209324 (+) | True | G68304 |
| TU80993 | lncRNA | downstream | 338070 | 21234025 ~ 21234258 (+) | True | G68313 |
| TU81190 | lncRNA | downstream | 420300 | 21316255 ~ 21316515 (+) | True | G68435 |
| TU81189 | lncRNA | downstream | 425190 | 21321145 ~ 21321406 (+) | False | plag1 |
| XM_026937340.2 | mRNA | upstream | 17900 | 20843344 ~ 20846978 (+) | True | LOC113540687 |
| XM_026937256.2 | mRNA | upstream | 125704 | 20735827 ~ 20739174 (+) | True | cd248a |
| XM_026937147.2 | mRNA | upstream | 172656 | 20682708 ~ 20692222 (+) | True | rce1a |
| XM_026937148.2 | mRNA | upstream | 177113 | 20682708 ~ 20687765 (+) | False | rce1a |
| XM_026936344.2 | mRNA | upstream | 204323 | 20652575 ~ 20660555 (+) | True | rab1ba |
| XM_026936124.2 | mRNA | downstream | 15695 | 20911650 ~ 20926058 (+) | True | arsj |
| XM_026937309.2 | mRNA | downstream | 39730 | 20935685 ~ 21012256 (+) | True | camk2d1 |
| XM_026937311.2 | mRNA | downstream | 39730 | 20935685 ~ 21012256 (+) | False | camk2d1 |
| XM_026937308.2 | mRNA | downstream | 39730 | 20935685 ~ 21012256 (+) | False | camk2d1 |
| XM_026937310.2 | mRNA | downstream | 39730 | 20935685 ~ 21012256 (+) | False | camk2d1 |
| trnaa-cgc | other | upstream | 512393 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80337 | other | upstream | 710107 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnar-ucu_2 | other | upstream | 763780 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| trnah-gug_5 | other | upstream | 1035988 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 1036496 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU80896 | other | downstream | 124303 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 431391 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| XR_004577949.1 | other | downstream | 733121 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | downstream | 733121 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_004578015.1 | other | downstream | 856461 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
