Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81190 |
| length | 261 |
| lncRNA type | intronic |
| GC content | 0.28 |
| exon number | 1 |
| gene id | G68435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21316255 ~ 21316515 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0019825 | oxygen binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80993 | lncRNA | upstream | 81997 | 21234025 ~ 21234258 (+) | True | G68313 |
| TU80981 | lncRNA | upstream | 106931 | 21205745 ~ 21209324 (+) | True | G68304 |
| TU80969 | lncRNA | upstream | 127121 | 21188531 ~ 21189134 (+) | True | G68299 |
| TU80850 | lncRNA | upstream | 420300 | 20864878 ~ 20895955 (+) | True | G68192 |
| TU80696 | lncRNA | upstream | 623144 | 20692263 ~ 20693111 (+) | True | G68070 |
| TU81189 | lncRNA | downstream | 4630 | 21321145 ~ 21321406 (+) | False | plag1 |
| TU81294 | lncRNA | downstream | 170459 | 21486974 ~ 21487488 (+) | True | G68523 |
| TU81417 | lncRNA | downstream | 416431 | 21732946 ~ 21749319 (+) | True | G68621 |
| TU81415 | lncRNA | downstream | 437593 | 21754108 ~ 21762282 (+) | False | LOC113540377 |
| TU81416 | lncRNA | downstream | 437593 | 21754108 ~ 21762229 (+) | False | LOC113540377 |
| XM_026935823.2 | mRNA | upstream | 12640 | 21298137 ~ 21303615 (+) | True | sdr16c5b |
| XM_026937031.2 | mRNA | upstream | 28896 | 21283954 ~ 21287359 (+) | False | penkb |
| XM_026937030.2 | mRNA | upstream | 28896 | 21283959 ~ 21287359 (+) | True | penkb |
| XM_026935832.2 | mRNA | upstream | 121565 | 21189573 ~ 21194690 (+) | True | ggh |
| XM_034303658.1 | mRNA | upstream | 121565 | 21191377 ~ 21194690 (+) | False | ggh |
| XM_026936371.2 | mRNA | downstream | 9508 | 21326023 ~ 21328840 (+) | True | rps20 |
| XM_026936369.2 | mRNA | downstream | 13776 | 21330291 ~ 21337139 (+) | True | zgc:56231 |
| XM_026936873.2 | mRNA | downstream | 104070 | 21420585 ~ 21424078 (+) | True | lypla1 |
| XM_026936931.2 | mRNA | downstream | 142596 | 21459111 ~ 21465823 (+) | True | LOC113540433 |
| XM_034303977.1 | mRNA | downstream | 142619 | 21459134 ~ 21465823 (+) | False | LOC113540433 |
| TU80896 | other | upstream | 282502 | 21020258 ~ 21033753 (+) | True | G68232 |
| trnaa-cgc | other | upstream | 963770 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80337 | other | upstream | 1161484 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnar-ucu_2 | other | upstream | 1215157 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| trnah-gug_5 | other | upstream | 1487365 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| XR_003404073.2 | other | downstream | 10831 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| XR_004577949.1 | other | downstream | 312561 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | downstream | 312561 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_004578015.1 | other | downstream | 435901 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
| XR_004578017.1 | other | downstream | 437503 | 21754018 ~ 21762301 (+) | False | LOC113540377 |
