Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81294 |
| length | 515 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G68523 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21486974 ~ 21487488 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81189 | lncRNA | upstream | 165568 | 21321145 ~ 21321406 (+) | False | plag1 |
| TU81190 | lncRNA | upstream | 170459 | 21316255 ~ 21316515 (+) | True | G68435 |
| TU80993 | lncRNA | upstream | 252716 | 21234025 ~ 21234258 (+) | True | G68313 |
| TU80981 | lncRNA | upstream | 277650 | 21205745 ~ 21209324 (+) | True | G68304 |
| TU80969 | lncRNA | upstream | 297840 | 21188531 ~ 21189134 (+) | True | G68299 |
| TU81417 | lncRNA | downstream | 245458 | 21732946 ~ 21749319 (+) | True | G68621 |
| TU81415 | lncRNA | downstream | 266620 | 21754108 ~ 21762282 (+) | False | LOC113540377 |
| TU81416 | lncRNA | downstream | 266620 | 21754108 ~ 21762229 (+) | False | LOC113540377 |
| TU81502 | lncRNA | downstream | 427318 | 21914806 ~ 21917776 (+) | True | G68687 |
| TU81775 | lncRNA | downstream | 757100 | 22244588 ~ 22244825 (+) | True | G68947 |
| XM_026935852.2 | mRNA | upstream | 6494 | 21475271 ~ 21480480 (+) | True | chmp5b |
| XM_026936931.2 | mRNA | upstream | 21151 | 21459111 ~ 21465823 (+) | True | LOC113540433 |
| XM_034303977.1 | mRNA | upstream | 21151 | 21459134 ~ 21465823 (+) | False | LOC113540433 |
| XM_026936873.2 | mRNA | upstream | 62896 | 21420585 ~ 21424078 (+) | True | lypla1 |
| XM_026936369.2 | mRNA | upstream | 149835 | 21330291 ~ 21337139 (+) | True | zgc:56231 |
| XM_026936683.2 | mRNA | downstream | 9465 | 21496953 ~ 21535633 (+) | True | myom1b |
| XM_026936687.2 | mRNA | downstream | 9465 | 21496953 ~ 21535633 (+) | False | myom1b |
| XM_026936688.2 | mRNA | downstream | 9465 | 21496953 ~ 21535633 (+) | False | myom1b |
| XM_026936684.2 | mRNA | downstream | 9465 | 21496953 ~ 21535633 (+) | False | myom1b |
| XM_026936689.2 | mRNA | downstream | 9465 | 21496953 ~ 21535633 (+) | False | myom1b |
| XR_003404073.2 | other | upstream | 159554 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| TU80896 | other | upstream | 453221 | 21020258 ~ 21033753 (+) | True | G68232 |
| trnaa-cgc | other | upstream | 1134489 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80337 | other | upstream | 1332203 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnar-ucu_2 | other | upstream | 1385876 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| XR_004577949.1 | other | downstream | 141588 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | downstream | 141588 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_004578015.1 | other | downstream | 264928 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
| XR_004578017.1 | other | downstream | 266530 | 21754018 ~ 21762301 (+) | False | LOC113540377 |
| XR_003404030.2 | other | downstream | 266592 | 21754080 ~ 21762301 (+) | True | LOC113540377 |
