Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81416 |
| length | 555 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC113540377 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21752416 ~ 21762301 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81417 | lncRNA | upstream | 4789 | 21732946 ~ 21749319 (+) | True | G68621 |
| TU81294 | lncRNA | upstream | 266620 | 21486974 ~ 21487488 (+) | True | G68523 |
| TU81189 | lncRNA | upstream | 432702 | 21321145 ~ 21321406 (+) | False | plag1 |
| TU81190 | lncRNA | upstream | 437593 | 21316255 ~ 21316515 (+) | True | G68435 |
| TU80993 | lncRNA | upstream | 519850 | 21234025 ~ 21234258 (+) | True | G68313 |
| TU81502 | lncRNA | downstream | 152577 | 21914806 ~ 21917776 (+) | True | G68687 |
| TU81775 | lncRNA | downstream | 482359 | 22244588 ~ 22244825 (+) | True | G68947 |
| TU81789 | lncRNA | downstream | 620865 | 22383094 ~ 22387745 (+) | True | G68955 |
| TU81788 | lncRNA | downstream | 630610 | 22392839 ~ 22397101 (+) | True | G68954 |
| TU81842 | lncRNA | downstream | 765099 | 22527328 ~ 22527556 (+) | True | G68999 |
| XM_026936822.2 | mRNA | upstream | 5395 | 21741189 ~ 21748713 (+) | True | enosf1 |
| XM_026935991.2 | mRNA | upstream | 113951 | 21629077 ~ 21640157 (+) | False | mettl4 |
| XM_034303841.1 | mRNA | upstream | 202298 | 21536003 ~ 21551810 (+) | True | LOC113540483 |
| XM_026936686.2 | mRNA | upstream | 218475 | 21496955 ~ 21535633 (+) | False | myom1b |
| XM_026936691.2 | mRNA | upstream | 223982 | 21496953 ~ 21530126 (+) | False | myom1b |
| XM_026936530.2 | mRNA | downstream | 4823 | 21767052 ~ 21776821 (+) | True | LOC113540212 |
| XM_026936150.2 | mRNA | downstream | 24961 | 21787190 ~ 21793201 (+) | True | LOC113539992 |
| XM_026936379.2 | mRNA | downstream | 45495 | 21807724 ~ 21828839 (+) | True | mrc1a |
| XM_026936380.2 | mRNA | downstream | 45496 | 21807725 ~ 21828838 (+) | False | mrc1a |
| XM_026936381.2 | mRNA | downstream | 66795 | 21829024 ~ 21843884 (+) | True | LOC113540130 |
| XR_004577949.1 | other | upstream | 114218 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | upstream | 114218 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_003404073.2 | other | upstream | 426688 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| TU80896 | other | upstream | 720355 | 21020258 ~ 21033753 (+) | True | G68232 |
| trnaa-cgc | other | upstream | 1401623 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU82445 | other | downstream | 1556275 | 23318504 ~ 23320343 (+) | True | G69509 |
| TU83028 | other | downstream | 2346566 | 24108795 ~ 24109889 (+) | True | G69971 |
| XR_003403979.2 | other | downstream | 3096797 | 24859026 ~ 24871263 (+) | False | kif2c |
| XR_003404013.2 | other | downstream | 3945598 | 25707827 ~ 25881109 (+) | False | tnr |
| TU84209 | other | downstream | 4135906 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
