Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU81417 |
| length | 444 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G68621 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21732946 ~ 21749319 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81294 | lncRNA | upstream | 245458 | 21486974 ~ 21487488 (+) | True | G68523 |
| TU81189 | lncRNA | upstream | 411540 | 21321145 ~ 21321406 (+) | False | plag1 |
| TU81190 | lncRNA | upstream | 416431 | 21316255 ~ 21316515 (+) | True | G68435 |
| TU80993 | lncRNA | upstream | 498688 | 21234025 ~ 21234258 (+) | True | G68313 |
| TU80981 | lncRNA | upstream | 523622 | 21205745 ~ 21209324 (+) | True | G68304 |
| TU81415 | lncRNA | downstream | 4789 | 21754108 ~ 21762282 (+) | False | LOC113540377 |
| TU81416 | lncRNA | downstream | 4789 | 21754108 ~ 21762229 (+) | False | LOC113540377 |
| TU81502 | lncRNA | downstream | 165487 | 21914806 ~ 21917776 (+) | True | G68687 |
| TU81775 | lncRNA | downstream | 495269 | 22244588 ~ 22244825 (+) | True | G68947 |
| TU81789 | lncRNA | downstream | 633775 | 22383094 ~ 22387745 (+) | True | G68955 |
| XM_026935991.2 | mRNA | upstream | 92789 | 21629077 ~ 21640157 (+) | False | mettl4 |
| XM_034303841.1 | mRNA | upstream | 181136 | 21536003 ~ 21551810 (+) | True | LOC113540483 |
| XM_026936683.2 | mRNA | upstream | 197313 | 21496953 ~ 21535633 (+) | True | myom1b |
| XM_026936687.2 | mRNA | upstream | 197313 | 21496953 ~ 21535633 (+) | False | myom1b |
| XM_026936688.2 | mRNA | upstream | 197313 | 21496953 ~ 21535633 (+) | False | myom1b |
| XM_034303777.1 | mRNA | downstream | 4761 | 21754080 ~ 21762301 (+) | False | LOC113540377 |
| XM_026936530.2 | mRNA | downstream | 17733 | 21767052 ~ 21776821 (+) | True | LOC113540212 |
| XM_026936150.2 | mRNA | downstream | 37871 | 21787190 ~ 21793201 (+) | True | LOC113539992 |
| XM_026936379.2 | mRNA | downstream | 58405 | 21807724 ~ 21828839 (+) | True | mrc1a |
| XM_026936380.2 | mRNA | downstream | 58406 | 21807725 ~ 21828838 (+) | False | mrc1a |
| XR_004577949.1 | other | upstream | 93056 | 21629076 ~ 21639890 (+) | True | mettl4 |
| XR_004577950.1 | other | upstream | 93056 | 21629076 ~ 21639890 (+) | False | mettl4 |
| XR_003404073.2 | other | upstream | 405526 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
| TU80896 | other | upstream | 699193 | 21020258 ~ 21033753 (+) | True | G68232 |
| trnaa-cgc | other | upstream | 1380461 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| XR_004578015.1 | other | downstream | 3097 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
| XR_004578017.1 | other | downstream | 4699 | 21754018 ~ 21762301 (+) | False | LOC113540377 |
| XR_003404030.2 | other | downstream | 4761 | 21754080 ~ 21762301 (+) | True | LOC113540377 |
| XR_004578016.1 | other | downstream | 7462 | 21756781 ~ 21762301 (+) | False | LOC113540377 |
| XR_004578018.1 | other | downstream | 8529 | 21757848 ~ 21762301 (+) | False | LOC113540377 |
