Item | Value |
---|---|
RNA id | TU82375 |
length | 496 |
lncRNA type | inter_gene |
GC content | 0.47 |
exon number | 2 |
gene id | G69449 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 23291410 ~ 23291998 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU82369 | lncRNA | upstream | 6484 | 23284554 ~ 23284926 (+) | True | G69443 |
TU82192 | lncRNA | upstream | 287308 | 23001998 ~ 23004102 (+) | True | G69294 |
XR_003404049.2 | lncRNA | upstream | 352669 | 22926810 ~ 22938741 (+) | True | LOC113540593 |
TU82061 | lncRNA | upstream | 638963 | 22649943 ~ 22652447 (+) | False | LOC113540463 |
TU81842 | lncRNA | upstream | 763854 | 22527328 ~ 22527556 (+) | True | G68999 |
TU82453 | lncRNA | downstream | 39035 | 23331033 ~ 23331529 (+) | True | G69514 |
TU82463 | lncRNA | downstream | 75663 | 23367661 ~ 23368677 (+) | True | G69522 |
TU82521 | lncRNA | downstream | 155465 | 23447463 ~ 23457206 (+) | True | G69570 |
TU82635 | lncRNA | downstream | 318955 | 23610953 ~ 23611157 (+) | True | G69641 |
XR_004578011.1 | lncRNA | downstream | 362924 | 23654922 ~ 23767863 (+) | False | LOC117597085 |
XM_026936338.2 | mRNA | upstream | 14609 | 23273523 ~ 23276801 (+) | False | ackr4a |
XM_034303654.1 | mRNA | upstream | 14609 | 23273545 ~ 23276801 (+) | True | ackr4a |
XM_026936337.2 | mRNA | upstream | 14609 | 23273545 ~ 23276801 (+) | False | ackr4a |
XM_026937016.2 | mRNA | upstream | 60957 | 23215075 ~ 23230453 (+) | True | si:ch211-106h4.6 |
XM_034303414.1 | mRNA | upstream | 77219 | 23199939 ~ 23214191 (+) | False | si:ch211-106h4.4 |
XM_026936872.2 | mRNA | downstream | 53060 | 23345058 ~ 23349627 (+) | True | rnf182 |
XM_026936893.2 | mRNA | downstream | 61971 | 23353969 ~ 23376185 (+) | False | ranbp9 |
XM_026936894.2 | mRNA | downstream | 61971 | 23353969 ~ 23376185 (+) | False | ranbp9 |
XM_026936892.2 | mRNA | downstream | 61973 | 23353971 ~ 23376185 (+) | True | ranbp9 |
XM_026936928.2 | mRNA | downstream | 95011 | 23387009 ~ 23391001 (+) | True | epdr1 |
XR_004578015.1 | other | upstream | 1529109 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
TU82445 | other | downstream | 26506 | 23318504 ~ 23320343 (+) | True | G69509 |
TU83028 | other | downstream | 816797 | 24108795 ~ 24109889 (+) | True | G69971 |
XR_003403979.2 | other | downstream | 1567028 | 24859026 ~ 24871263 (+) | False | kif2c |
XR_003404013.2 | other | downstream | 2415829 | 25707827 ~ 25881109 (+) | False | tnr |
TU84209 | other | downstream | 2606137 | 25898135 ~ 25901843 (+) | False | LOC113539772 |