Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU82696 |
| length | 449 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | LOC117597085 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 23654922 ~ 23767863 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82635 | lncRNA | upstream | 43780 | 23610953 ~ 23611157 (+) | True | G69641 |
| TU82521 | lncRNA | upstream | 197731 | 23447463 ~ 23457206 (+) | True | G69570 |
| TU82463 | lncRNA | upstream | 286260 | 23367661 ~ 23368677 (+) | True | G69522 |
| TU82453 | lncRNA | upstream | 323408 | 23331033 ~ 23331529 (+) | True | G69514 |
| TU82375 | lncRNA | upstream | 362939 | 23291410 ~ 23291998 (+) | True | G69449 |
| XR_004578010.1 | lncRNA | downstream | 8817 | 23664855 ~ 23767863 (+) | False | LOC117597085 |
| TU82728 | lncRNA | downstream | 102346 | 23758384 ~ 23774271 (+) | True | G69722 |
| TU82749 | lncRNA | downstream | 190607 | 23846645 ~ 23849514 (+) | True | G69735 |
| TU82750 | lncRNA | downstream | 199037 | 23855075 ~ 23857571 (+) | True | G69736 |
| TU82897 | lncRNA | downstream | 265762 | 23921800 ~ 23922561 (+) | True | G69870 |
| XM_034304162.1 | mRNA | upstream | 4304 | 23648271 ~ 23650633 (+) | True | mycb |
| XM_026937348.2 | mRNA | upstream | 4304 | 23648271 ~ 23650633 (+) | False | mycb |
| XM_026937124.2 | mRNA | upstream | 13468 | 23614440 ~ 23641469 (+) | True | ankhb |
| XM_026935925.2 | mRNA | upstream | 46736 | 23594961 ~ 23608201 (+) | True | otulinb |
| XM_026937189.2 | mRNA | upstream | 253207 | 23392658 ~ 23401730 (+) | True | stard3nl |
| XM_026936232.2 | mRNA | downstream | 357818 | 24013856 ~ 24016743 (+) | True | LOC113540051 |
| XM_034304069.1 | mRNA | downstream | 365027 | 24021065 ~ 24024165 (+) | True | LOC113540619 |
| XM_026937230.2 | mRNA | downstream | 433911 | 24089949 ~ 24104733 (+) | True | klhl18 |
| XM_026936985.2 | mRNA | downstream | 465515 | 24121553 ~ 24127236 (+) | False | zgc:136930 |
| XM_034303446.1 | mRNA | downstream | 465515 | 24121553 ~ 24127179 (+) | True | zgc:136930 |
| TU82445 | other | upstream | 334594 | 23318504 ~ 23320343 (+) | True | G69509 |
| XR_004578017.1 | other | upstream | 1892636 | 21754018 ~ 21762301 (+) | False | LOC113540377 |
| TU83028 | other | downstream | 452757 | 24108795 ~ 24109889 (+) | True | G69971 |
| XR_003403979.2 | other | downstream | 1202988 | 24859026 ~ 24871263 (+) | False | kif2c |
| XR_003404013.2 | other | downstream | 2051789 | 25707827 ~ 25881109 (+) | False | tnr |
| TU84209 | other | downstream | 2242097 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
| TU84572 | other | downstream | 2572726 | 26228764 ~ 26229191 (+) | True | G71385 |
