Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU83028 |
| length | 338 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 3 |
| gene id | G69971 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 24108795 ~ 24109889 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU83005 | lncRNA | upstream | 2572 | 24028106 ~ 24106223 (+) | False | klhl18 |
| TU83023 | lncRNA | upstream | 24577 | 24083606 ~ 24084218 (+) | True | G69966 |
| TU82994 | lncRNA | upstream | 98935 | 24008464 ~ 24009860 (+) | False | G69946 |
| TU82993 | lncRNA | upstream | 100132 | 24007703 ~ 24008663 (+) | True | G69946 |
| TU82909 | lncRNA | upstream | 165723 | 23940241 ~ 23943072 (+) | True | G69878 |
| TU83047 | lncRNA | downstream | 28746 | 24138635 ~ 24138888 (+) | True | G69987 |
| TU83213 | lncRNA | downstream | 456356 | 24566245 ~ 24566613 (+) | True | G70129 |
| TU83214 | lncRNA | downstream | 457111 | 24567000 ~ 24567318 (+) | True | G70130 |
| TU83218 | lncRNA | downstream | 460759 | 24570648 ~ 24570850 (+) | True | G70134 |
| TU83222 | lncRNA | downstream | 464447 | 24574336 ~ 24574570 (+) | True | G70138 |
| XM_026937230.2 | mRNA | upstream | 4062 | 24089949 ~ 24104733 (+) | True | klhl18 |
| XM_034304069.1 | mRNA | upstream | 84630 | 24021065 ~ 24024165 (+) | True | LOC113540619 |
| XM_026936232.2 | mRNA | upstream | 92052 | 24013856 ~ 24016743 (+) | True | LOC113540051 |
| XM_034304162.1 | mRNA | upstream | 458162 | 23648271 ~ 23650633 (+) | True | mycb |
| XM_026937348.2 | mRNA | upstream | 458162 | 23648271 ~ 23650633 (+) | False | mycb |
| XM_026936985.2 | mRNA | downstream | 11664 | 24121553 ~ 24127236 (+) | False | zgc:136930 |
| XM_034303446.1 | mRNA | downstream | 11664 | 24121553 ~ 24127179 (+) | True | zgc:136930 |
| XM_026937349.2 | mRNA | downstream | 24787 | 24134676 ~ 24136808 (+) | True | ccr9a |
| XM_034303198.1 | mRNA | downstream | 35193 | 24145082 ~ 24148968 (+) | True | LOC113540392 |
| XM_026936855.2 | mRNA | downstream | 35193 | 24145082 ~ 24148968 (+) | False | LOC113540392 |
| TU82445 | other | upstream | 788452 | 23318504 ~ 23320343 (+) | True | G69509 |
| XR_004578015.1 | other | upstream | 2346494 | 21752416 ~ 21762301 (+) | False | LOC113540377 |
| XR_003403979.2 | other | downstream | 749137 | 24859026 ~ 24871263 (+) | False | kif2c |
| XR_003404013.2 | other | downstream | 1597938 | 25707827 ~ 25881109 (+) | False | tnr |
| TU84209 | other | downstream | 1788246 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
| TU84572 | other | downstream | 2118875 | 26228764 ~ 26229191 (+) | True | G71385 |
| XR_003404061.2 | other | downstream | 2178401 | 26288290 ~ 26292784 (+) | True | zgc:66427 |
