Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU83223 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G70139 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 24583176 ~ 24583376 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU83222 | lncRNA | upstream | 8606 | 24574336 ~ 24574570 (+) | True | G70138 |
| TU83218 | lncRNA | upstream | 12326 | 24570648 ~ 24570850 (+) | True | G70134 |
| TU83214 | lncRNA | upstream | 15858 | 24567000 ~ 24567318 (+) | True | G70130 |
| TU83213 | lncRNA | upstream | 16563 | 24566245 ~ 24566613 (+) | True | G70129 |
| TU83047 | lncRNA | upstream | 444288 | 24138635 ~ 24138888 (+) | True | G69987 |
| TU83224 | lncRNA | downstream | 1238 | 24584614 ~ 24584839 (+) | True | G70140 |
| TU83226 | lncRNA | downstream | 2051 | 24585427 ~ 24585907 (+) | True | G70142 |
| TU83289 | lncRNA | downstream | 98605 | 24681981 ~ 24749913 (+) | True | G70204 |
| XR_003404038.2 | lncRNA | downstream | 255845 | 24839221 ~ 24846721 (+) | False | LOC113540553 |
| TU83566 | lncRNA | downstream | 255871 | 24839247 ~ 24849487 (+) | True | LOC113540553 |
| XM_026936540.2 | mRNA | upstream | 21898 | 24507205 ~ 24561278 (+) | True | slc6a9 |
| XM_034303740.1 | mRNA | upstream | 21898 | 24509347 ~ 24561278 (+) | False | slc6a9 |
| XM_026936539.2 | mRNA | upstream | 21898 | 24534919 ~ 24561278 (+) | False | slc6a9 |
| XM_034303741.1 | mRNA | upstream | 21898 | 24550865 ~ 24561278 (+) | False | slc6a9 |
| XM_026935888.2 | mRNA | upstream | 104372 | 24476189 ~ 24478804 (+) | True | klf17 |
| XM_026936117.2 | mRNA | downstream | 3831 | 24587207 ~ 24597109 (+) | True | zgc:113531 |
| XM_026936109.2 | mRNA | downstream | 208919 | 24792295 ~ 24807404 (+) | True | kiss1ra |
| XM_026935923.2 | mRNA | downstream | 275650 | 24859026 ~ 24871164 (+) | True | kif2c |
| XM_026935924.2 | mRNA | downstream | 275651 | 24859027 ~ 24871164 (+) | False | kif2c |
| XM_026937276.2 | mRNA | downstream | 411501 | 24994877 ~ 25013306 (+) | True | klhl20 |
| TU83028 | other | upstream | 473287 | 24108795 ~ 24109889 (+) | True | G69971 |
| TU82445 | other | upstream | 1262833 | 23318504 ~ 23320343 (+) | True | G69509 |
| XR_003404030.2 | other | upstream | 2820875 | 21754080 ~ 21762301 (+) | True | LOC113540377 |
| XR_003403979.2 | other | downstream | 275650 | 24859026 ~ 24871263 (+) | False | kif2c |
| XR_003404013.2 | other | downstream | 1124451 | 25707827 ~ 25881109 (+) | False | tnr |
| TU84209 | other | downstream | 1314759 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
| TU84572 | other | downstream | 1645388 | 26228764 ~ 26229191 (+) | True | G71385 |
| XR_003404061.2 | other | downstream | 1704914 | 26288290 ~ 26292784 (+) | True | zgc:66427 |
