Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU84331 |
| length | 1017 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 4 |
| gene id | G71163 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 25923952 ~ 25928740 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84208 | lncRNA | upstream | 21993 | 25898135 ~ 25901959 (+) | False | LOC113539772 |
| TU84210 | lncRNA | upstream | 22036 | 25898135 ~ 25901916 (+) | False | LOC113539772 |
| TU84212 | lncRNA | upstream | 22036 | 25898135 ~ 25901916 (+) | False | LOC113539772 |
| TU84214 | lncRNA | upstream | 22109 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
| TU83953 | lncRNA | upstream | 233835 | 25653438 ~ 25690117 (+) | True | G70813 |
| TU84503 | lncRNA | downstream | 110442 | 26039182 ~ 26039383 (+) | True | G71322 |
| TU84510 | lncRNA | downstream | 199879 | 26128619 ~ 26128826 (+) | True | G71329 |
| TU84555 | lncRNA | downstream | 276818 | 26205558 ~ 26205786 (+) | True | G71373 |
| TU84556 | lncRNA | downstream | 279580 | 26208320 ~ 26208544 (+) | True | G71374 |
| TU84559 | lncRNA | downstream | 289386 | 26218126 ~ 26223996 (+) | False | LOC117597118 |
| XM_034304136.1 | mRNA | upstream | 21946 | 25897017 ~ 25902006 (+) | False | LOC113539772 |
| XM_026935816.2 | mRNA | upstream | 21946 | 25898027 ~ 25902006 (+) | True | LOC113539772 |
| XM_034304137.1 | mRNA | upstream | 21946 | 25898445 ~ 25902006 (+) | False | LOC113539772 |
| XM_026936640.2 | mRNA | upstream | 42842 | 25707827 ~ 25881110 (+) | True | tnr |
| XM_034303945.1 | mRNA | upstream | 42842 | 25707827 ~ 25881110 (+) | False | tnr |
| XM_026936184.2 | mRNA | downstream | 22414 | 25951154 ~ 25953899 (+) | True | mrps14 |
| XM_026935822.2 | mRNA | downstream | 26216 | 25954956 ~ 25964158 (+) | False | cacybp |
| XM_026935821.2 | mRNA | downstream | 26239 | 25954979 ~ 25964158 (+) | True | cacybp |
| XM_026936904.2 | mRNA | downstream | 45141 | 25973881 ~ 25979456 (+) | True | plk3 |
| XM_026936905.2 | mRNA | downstream | 45141 | 25973881 ~ 25979456 (+) | False | plk3 |
| TU84209 | other | upstream | 22109 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
| XR_003404013.2 | other | upstream | 42843 | 25707827 ~ 25881109 (+) | False | tnr |
| XR_003403979.2 | other | upstream | 1052689 | 24859026 ~ 24871263 (+) | False | kif2c |
| TU83028 | other | upstream | 1814063 | 24108795 ~ 24109889 (+) | True | G69971 |
| TU82445 | other | upstream | 2603609 | 23318504 ~ 23320343 (+) | True | G69509 |
| TU84572 | other | downstream | 300024 | 26228764 ~ 26229191 (+) | True | G71385 |
| XR_003404061.2 | other | downstream | 359550 | 26288290 ~ 26292784 (+) | True | zgc:66427 |
| XR_003404062.2 | other | downstream | 359550 | 26288290 ~ 26292784 (+) | False | zgc:66427 |
| XR_004578101.1 | other | downstream | 359552 | 26288292 ~ 26292784 (+) | False | zgc:66427 |
| XR_003404060.2 | other | downstream | 359554 | 26288294 ~ 26292784 (+) | False | zgc:66427 |
