Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU84565 |
| length | 996 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 6 |
| gene id | G71381 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26224912 ~ 26226337 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84559 | lncRNA | upstream | 916 | 26218126 ~ 26223996 (+) | False | LOC117597118 |
| TU84556 | lncRNA | upstream | 16368 | 26208320 ~ 26208544 (+) | True | G71374 |
| TU84555 | lncRNA | upstream | 19126 | 26205558 ~ 26205786 (+) | True | G71373 |
| TU84510 | lncRNA | upstream | 96086 | 26128619 ~ 26128826 (+) | True | G71329 |
| TU84503 | lncRNA | upstream | 185529 | 26039182 ~ 26039383 (+) | True | G71322 |
| TU84608 | lncRNA | downstream | 68418 | 26294755 ~ 26294982 (+) | True | G71408 |
| TU84695 | lncRNA | downstream | 237674 | 26464011 ~ 26464314 (+) | True | G71482 |
| TU84702 | lncRNA | downstream | 246238 | 26472575 ~ 26551026 (+) | True | G71485 |
| TU84751 | lncRNA | downstream | 441425 | 26667762 ~ 26668128 (+) | True | G71519 |
| TU84789 | lncRNA | downstream | 558235 | 26784572 ~ 26786560 (+) | True | G71550 |
| XM_034303850.1 | mRNA | upstream | 874 | 26216064 ~ 26224038 (+) | True | LOC117597118 |
| XM_034303950.1 | mRNA | upstream | 100766 | 26056924 ~ 26124146 (+) | False | rasal2 |
| XM_034303951.1 | mRNA | upstream | 100766 | 26056924 ~ 26124146 (+) | False | rasal2 |
| XM_034303956.1 | mRNA | upstream | 100766 | 26073043 ~ 26124146 (+) | False | rasal2 |
| XM_034303952.1 | mRNA | upstream | 102346 | 26056924 ~ 26122566 (+) | False | rasal2 |
| XM_026937232.2 | mRNA | downstream | 61956 | 26288293 ~ 26292784 (+) | False | zgc:66427 |
| XM_026935880.2 | mRNA | downstream | 88006 | 26314343 ~ 26318878 (+) | True | si:ch211-284o19.8 |
| XM_034303638.1 | mRNA | downstream | 101590 | 26327927 ~ 26338595 (+) | False | mettl17 |
| XM_026935878.2 | mRNA | downstream | 101957 | 26328294 ~ 26338595 (+) | True | mettl17 |
| XM_034303637.1 | mRNA | downstream | 102364 | 26328701 ~ 26338595 (+) | False | mettl17 |
| TU84209 | other | upstream | 323069 | 25898135 ~ 25901843 (+) | False | LOC113539772 |
| XR_003404013.2 | other | upstream | 343803 | 25707827 ~ 25881109 (+) | False | tnr |
| XR_003403979.2 | other | upstream | 1353649 | 24859026 ~ 24871263 (+) | False | kif2c |
| TU83028 | other | upstream | 2115023 | 24108795 ~ 24109889 (+) | True | G69971 |
| TU82445 | other | upstream | 2904569 | 23318504 ~ 23320343 (+) | True | G69509 |
| TU84572 | other | downstream | 2427 | 26228764 ~ 26229191 (+) | True | G71385 |
| XR_003404061.2 | other | downstream | 61953 | 26288290 ~ 26292784 (+) | True | zgc:66427 |
| XR_003404062.2 | other | downstream | 61953 | 26288290 ~ 26292784 (+) | False | zgc:66427 |
| XR_004578101.1 | other | downstream | 61955 | 26288292 ~ 26292784 (+) | False | zgc:66427 |
| XR_003404060.2 | other | downstream | 61957 | 26288294 ~ 26292784 (+) | False | zgc:66427 |
