Item | Value |
---|---|
RNA id | TU84608 |
length | 228 |
lncRNA type | inter_gene |
GC content | 0.34 |
exon number | 1 |
gene id | G71408 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 26294755 ~ 26294982 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
XR_004578087.1 | lncRNA | upstream | 68340 | 26225431 ~ 26226415 (+) | True | LOC117597184 |
TU84565 | lncRNA | upstream | 68418 | 26224912 ~ 26226337 (+) | True | G71381 |
TU84566 | lncRNA | upstream | 68418 | 26224912 ~ 26226337 (+) | False | G71381 |
TU84567 | lncRNA | upstream | 68418 | 26224912 ~ 26226337 (+) | False | G71381 |
XR_004578086.1 | lncRNA | upstream | 69391 | 26224918 ~ 26225364 (+) | True | LOC117597183 |
TU84695 | lncRNA | downstream | 169029 | 26464011 ~ 26464314 (+) | True | G71482 |
TU84702 | lncRNA | downstream | 177593 | 26472575 ~ 26551026 (+) | True | G71485 |
TU84751 | lncRNA | downstream | 372780 | 26667762 ~ 26668128 (+) | True | G71519 |
TU84789 | lncRNA | downstream | 489590 | 26784572 ~ 26786560 (+) | True | G71550 |
TU84796 | lncRNA | downstream | 513075 | 26808057 ~ 26856605 (+) | True | G71557 |
XM_026937232.2 | mRNA | upstream | 1971 | 26288293 ~ 26292784 (+) | False | zgc:66427 |
XM_034303850.1 | mRNA | upstream | 70717 | 26216064 ~ 26224038 (+) | True | LOC117597118 |
XM_034303950.1 | mRNA | upstream | 170609 | 26056924 ~ 26124146 (+) | False | rasal2 |
XM_026935880.2 | mRNA | downstream | 19361 | 26314343 ~ 26318878 (+) | True | si:ch211-284o19.8 |
XM_034303638.1 | mRNA | downstream | 32945 | 26327927 ~ 26338595 (+) | False | mettl17 |
XM_026935878.2 | mRNA | downstream | 33312 | 26328294 ~ 26338595 (+) | True | mettl17 |
XM_034303637.1 | mRNA | downstream | 33719 | 26328701 ~ 26338595 (+) | False | mettl17 |
XM_034303636.1 | mRNA | downstream | 33720 | 26328702 ~ 26338595 (+) | False | mettl17 |
XR_003404061.2 | other | upstream | 1971 | 26288290 ~ 26292784 (+) | True | zgc:66427 |
XR_003404062.2 | other | upstream | 1971 | 26288290 ~ 26292784 (+) | False | zgc:66427 |
XR_004578101.1 | other | upstream | 1971 | 26288292 ~ 26292784 (+) | False | zgc:66427 |
XR_003404060.2 | other | upstream | 1971 | 26288294 ~ 26292784 (+) | False | zgc:66427 |
TU84572 | other | upstream | 65564 | 26228764 ~ 26229191 (+) | True | G71385 |
TU84616 | other | downstream | 58207 | 26353189 ~ 26375779 (+) | True | LOC117597079 |
TU84618 | other | downstream | 58207 | 26353189 ~ 26364233 (+) | False | LOC117597079 |
XR_003404105.1 | other | downstream | 368989 | 26663971 ~ 26664082 (+) | True | LOC113540735 |
XR_003404108.2 | other | downstream | 818166 | 27113148 ~ 27113254 (+) | True | LOC113540738 |
trnat-ugu_5 | other | downstream | 1194271 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |