Item | Value |
---|---|
RNA id | TU84751 |
length | 367 |
lncRNA type | intronic |
GC content | 0.35 |
exon number | 1 |
gene id | G71519 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 26667762 ~ 26668128 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU84702 | lncRNA | upstream | 116736 | 26472575 ~ 26551026 (+) | True | G71485 |
TU84695 | lncRNA | upstream | 203448 | 26464011 ~ 26464314 (+) | True | G71482 |
TU84608 | lncRNA | upstream | 372780 | 26294755 ~ 26294982 (+) | True | G71408 |
XR_004578087.1 | lncRNA | upstream | 441347 | 26225431 ~ 26226415 (+) | True | LOC117597184 |
TU84567 | lncRNA | upstream | 441425 | 26224912 ~ 26226337 (+) | False | G71381 |
TU84789 | lncRNA | downstream | 116444 | 26784572 ~ 26786560 (+) | True | G71550 |
TU84796 | lncRNA | downstream | 139929 | 26808057 ~ 26856605 (+) | True | G71557 |
TU84807 | lncRNA | downstream | 204548 | 26872676 ~ 26881469 (+) | True | gng7 |
TU85145 | lncRNA | downstream | 374575 | 27042703 ~ 27042912 (+) | True | G71819 |
TU85154 | lncRNA | downstream | 405713 | 27073841 ~ 27074076 (+) | True | G71827 |
XM_026936646.2 | mRNA | upstream | 4047 | 26643100 ~ 26663715 (+) | True | pak2a |
XM_026936648.2 | mRNA | upstream | 4047 | 26643100 ~ 26663715 (+) | False | pak2a |
XM_026936647.2 | mRNA | upstream | 4047 | 26650575 ~ 26663715 (+) | False | pak2a |
XM_034303686.1 | mRNA | upstream | 25528 | 26632809 ~ 26642234 (+) | True | ing5b |
XM_026936650.2 | mRNA | upstream | 25528 | 26632817 ~ 26642234 (+) | False | ing5b |
XM_034304037.1 | mRNA | downstream | 17382 | 26685510 ~ 26688014 (+) | True | ptx3b |
XM_034304038.1 | mRNA | downstream | 17382 | 26685510 ~ 26688014 (+) | False | ptx3b |
XM_026936651.2 | mRNA | downstream | 20909 | 26689037 ~ 26696324 (+) | False | pdcd10b |
XM_034304158.1 | mRNA | downstream | 20909 | 26689037 ~ 26696324 (+) | False | pdcd10b |
XM_026936653.2 | mRNA | downstream | 20919 | 26689047 ~ 26696324 (+) | False | pdcd10b |
XR_003404105.1 | other | upstream | 3680 | 26663971 ~ 26664082 (+) | True | LOC113540735 |
TU84616 | other | upstream | 291983 | 26353189 ~ 26375779 (+) | True | LOC117597079 |
TU84618 | other | upstream | 303529 | 26353189 ~ 26364233 (+) | False | LOC117597079 |
XR_003404061.2 | other | upstream | 374978 | 26288290 ~ 26292784 (+) | True | zgc:66427 |
XR_003404108.2 | other | downstream | 445020 | 27113148 ~ 27113254 (+) | True | LOC113540738 |
trnat-ugu_5 | other | downstream | 821125 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
XR_003404069.1 | other | downstream | 888389 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
XR_003404070.2 | other | downstream | 889637 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
trnat-ugu_6 | other | downstream | 952477 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |