Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU84982 |
| length | 668 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G71696 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26667063 ~ 26667730 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84981 | lncRNA | downstream | 471 | 26666217 ~ 26666592 (-) | True | G71695 |
| TU84978 | lncRNA | downstream | 3285 | 26661859 ~ 26663778 (-) | True | G71693 |
| TU84896 | lncRNA | downstream | 107925 | 26558229 ~ 26559138 (-) | True | G71636 |
| TU84851 | lncRNA | downstream | 116033 | 26550094 ~ 26551030 (-) | True | G71596 |
| XR_004577960.1 | lncRNA | downstream | 167796 | 26497033 ~ 26499267 (-) | False | LOC113540239 |
| TU84983 | lncRNA | upstream | 565 | 26668295 ~ 26668558 (-) | True | G71697 |
| TU84984 | lncRNA | upstream | 2537 | 26670267 ~ 26671138 (-) | True | G71698 |
| TU84985 | lncRNA | upstream | 3530 | 26671260 ~ 26671536 (-) | True | G71699 |
| TU84986 | lncRNA | upstream | 3911 | 26671641 ~ 26671845 (-) | True | G71700 |
| TU84990 | lncRNA | upstream | 21340 | 26689070 ~ 26690394 (-) | True | G71704 |
| XM_026935989.2 | mRNA | downstream | 71073 | 26578794 ~ 26595990 (-) | False | sppl2 |
| XM_026935988.2 | mRNA | downstream | 71073 | 26578795 ~ 26595990 (-) | True | sppl2 |
| XM_026935883.2 | mRNA | downstream | 214232 | 26446458 ~ 26452831 (-) | True | si:dkeyp-66d1.7 |
| XM_034303639.1 | mRNA | downstream | 290655 | 26371921 ~ 26376408 (-) | True | ltb4r2b |
| XM_034303642.1 | mRNA | downstream | 300727 | 26338735 ~ 26366336 (-) | False | sdr39u1 |
| XM_026936649.2 | mRNA | upstream | 5017 | 26672747 ~ 26678848 (-) | True | ccnl1b |
| XM_026936093.2 | mRNA | upstream | 40352 | 26708082 ~ 26712304 (-) | True | slitrk3b |
| XM_034303683.1 | mRNA | upstream | 102852 | 26770582 ~ 26786518 (-) | True | copa |
| XM_026935911.2 | mRNA | upstream | 119357 | 26787087 ~ 26790914 (-) | True | pex19 |
| XM_034304027.1 | mRNA | upstream | 124293 | 26792023 ~ 26805367 (-) | False | map1sb |
| TU84853 | other | downstream | 116033 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | downstream | 116033 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU84653 | other | downstream | 290975 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU83344 | other | downstream | 2362137 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 2630209 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| TU85159 | other | upstream | 428872 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 536053 | 27203783 ~ 27204186 (-) | True | G71909 |
| trnat-ugu_3 | other | upstream | 727627 | 27395357 ~ 27395429 (-) | True | trnat-ugu_3 |
| trnat-ugu_4 | other | upstream | 728421 | 27396151 ~ 27396223 (-) | True | trnat-ugu_4 |
| XR_003404034.2 | other | upstream | 760690 | 27428420 ~ 27432678 (-) | False | LOC113540508 |
