Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85065 |
| length | 324 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G71764 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26894681 ~ 26895564 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85024 | lncRNA | downstream | 35226 | 26847346 ~ 26859455 (-) | True | G71734 |
| TU85022 | lncRNA | downstream | 38009 | 26853267 ~ 26856672 (-) | True | G71732 |
| TU84994 | lncRNA | downstream | 197584 | 26696893 ~ 26697097 (-) | True | G71707 |
| TU84992 | lncRNA | downstream | 198360 | 26694946 ~ 26696321 (-) | True | G71705 |
| TU84990 | lncRNA | downstream | 204287 | 26689070 ~ 26690394 (-) | True | G71704 |
| TU85066 | lncRNA | upstream | 39426 | 26934990 ~ 26935197 (-) | True | G71765 |
| TU85140 | lncRNA | upstream | 135753 | 27031317 ~ 27036462 (-) | True | G71815 |
| TU85141 | lncRNA | upstream | 135753 | 27031317 ~ 27035852 (-) | False | G71815 |
| TU85185 | lncRNA | upstream | 247542 | 27143106 ~ 27151314 (-) | False | G71854 |
| TU85183 | lncRNA | upstream | 253346 | 27148910 ~ 27151314 (-) | True | G71854 |
| XM_026937244.2 | mRNA | downstream | 5345 | 26881468 ~ 26889336 (-) | True | nadkb |
| XM_026937243.2 | mRNA | downstream | 5347 | 26881468 ~ 26889334 (-) | False | nadkb |
| XM_034303326.1 | mRNA | downstream | 49663 | 26835646 ~ 26845018 (-) | False | samd7 |
| XM_034303325.1 | mRNA | downstream | 50708 | 26835646 ~ 26843973 (-) | False | samd7 |
| XM_034303324.1 | mRNA | downstream | 51399 | 26835646 ~ 26843282 (-) | False | samd7 |
| XM_026936963.2 | mRNA | upstream | 8344 | 26903908 ~ 26913580 (-) | False | skila |
| XM_026936961.2 | mRNA | upstream | 8344 | 26903908 ~ 26913580 (-) | True | skila |
| XM_026936874.2 | mRNA | upstream | 21595 | 26917159 ~ 26933519 (-) | True | prkci |
| XM_026937110.2 | mRNA | upstream | 85625 | 26981189 ~ 26982209 (-) | True | LOC113540546 |
| XM_034303296.1 | mRNA | upstream | 209930 | 27105494 ~ 27108411 (-) | False | tmem125b |
| TU84853 | other | downstream | 343651 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | downstream | 343651 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU84653 | other | downstream | 518593 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU83344 | other | downstream | 2589755 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 2857827 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| TU85159 | other | upstream | 201038 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 308219 | 27203783 ~ 27204186 (-) | True | G71909 |
| trnat-ugu_3 | other | upstream | 499793 | 27395357 ~ 27395429 (-) | True | trnat-ugu_3 |
| trnat-ugu_4 | other | upstream | 500587 | 27396151 ~ 27396223 (-) | True | trnat-ugu_4 |
| XR_003404034.2 | other | upstream | 532856 | 27428420 ~ 27432678 (-) | False | LOC113540508 |
