Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85185 |
| length | 627 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G71854 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 27143106 ~ 27151314 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85140 | lncRNA | downstream | 106644 | 27031317 ~ 27036462 (-) | True | G71815 |
| TU85141 | lncRNA | downstream | 107254 | 27031317 ~ 27035852 (-) | False | G71815 |
| TU85066 | lncRNA | downstream | 207909 | 26934990 ~ 26935197 (-) | True | G71765 |
| TU85065 | lncRNA | downstream | 247542 | 26894681 ~ 26895564 (-) | True | G71764 |
| TU85024 | lncRNA | downstream | 283651 | 26847346 ~ 26859455 (-) | True | G71734 |
| TU85228 | lncRNA | upstream | 22738 | 27174052 ~ 27174536 (-) | True | G71892 |
| TU85232 | lncRNA | upstream | 28620 | 27179934 ~ 27180140 (-) | True | G71896 |
| TU85239 | lncRNA | upstream | 40148 | 27191462 ~ 27191809 (-) | True | G71903 |
| TU85241 | lncRNA | upstream | 44176 | 27195490 ~ 27195813 (-) | True | G71905 |
| TU85243 | lncRNA | upstream | 48104 | 27199418 ~ 27199741 (-) | True | G71907 |
| XM_034303296.1 | mRNA | downstream | 34695 | 27105494 ~ 27108411 (-) | False | tmem125b |
| XM_026935890.2 | mRNA | downstream | 34695 | 27105494 ~ 27108411 (-) | True | tmem125b |
| XM_026935891.2 | mRNA | downstream | 35317 | 27105494 ~ 27107789 (-) | False | tmem125b |
| XM_026937110.2 | mRNA | downstream | 160897 | 26981189 ~ 26982209 (-) | True | LOC113540546 |
| XM_026936874.2 | mRNA | downstream | 209587 | 26917159 ~ 26933519 (-) | True | prkci |
| XM_026936204.2 | mRNA | upstream | 2185 | 27153499 ~ 27158015 (-) | True | LOC113540028 |
| XM_026936576.2 | mRNA | upstream | 86630 | 27237944 ~ 27261901 (-) | False | LOC113540236 |
| XM_026936577.2 | mRNA | upstream | 86630 | 27237944 ~ 27261901 (-) | True | LOC113540236 |
| XM_026936091.2 | mRNA | upstream | 135847 | 27287161 ~ 27310976 (-) | True | LOC113539949 |
| XM_034304155.1 | mRNA | upstream | 229861 | 27381175 ~ 27385533 (-) | True | si:ch211-107p11.3 |
| TU85159 | other | downstream | 42248 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU84853 | other | downstream | 592076 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | downstream | 592076 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU84653 | other | downstream | 767018 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU83344 | other | downstream | 2838180 | 24304374 ~ 24304926 (-) | True | G70255 |
| TU85245 | other | upstream | 52469 | 27203783 ~ 27204186 (-) | True | G71909 |
| trnat-ugu_3 | other | upstream | 244043 | 27395357 ~ 27395429 (-) | True | trnat-ugu_3 |
| trnat-ugu_4 | other | upstream | 244837 | 27396151 ~ 27396223 (-) | True | trnat-ugu_4 |
| XR_003404034.2 | other | upstream | 277106 | 27428420 ~ 27432678 (-) | False | LOC113540508 |
| XR_004578066.1 | other | upstream | 396438 | 27547752 ~ 27555986 (-) | False | pcyt1aa |
