Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85202 |
| length | 229 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G71869 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 27218227 ~ 27218455 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85201 | lncRNA | upstream | 388 | 27217352 ~ 27217839 (+) | True | G71868 |
| TU85197 | lncRNA | upstream | 21854 | 27196001 ~ 27196373 (+) | True | G71864 |
| TU85154 | lncRNA | upstream | 144151 | 27073841 ~ 27074076 (+) | True | G71827 |
| TU85145 | lncRNA | upstream | 175315 | 27042703 ~ 27042912 (+) | True | G71819 |
| TU84807 | lncRNA | upstream | 336758 | 26872676 ~ 26881469 (+) | True | gng7 |
| TU85207 | lncRNA | downstream | 11407 | 27229862 ~ 27230100 (+) | True | G71874 |
| TU85277 | lncRNA | downstream | 65605 | 27284060 ~ 27284463 (+) | True | G71941 |
| TU85275 | lncRNA | downstream | 68718 | 27287173 ~ 27289705 (+) | True | G71939 |
| TU85279 | lncRNA | downstream | 74901 | 27293356 ~ 27295364 (+) | True | G71942 |
| TU85325 | lncRNA | downstream | 153018 | 27371473 ~ 27371678 (+) | True | G71977 |
| XM_026935836.2 | mRNA | upstream | 67103 | 27144064 ~ 27151124 (+) | True | ebna1bp2 |
| XM_026937317.2 | mRNA | upstream | 179868 | 27030740 ~ 27038359 (+) | True | LOC113540681 |
| XM_034303201.1 | mRNA | upstream | 179868 | 27030740 ~ 27038359 (+) | False | LOC113540681 |
| XM_026937336.2 | mRNA | upstream | 204582 | 26983742 ~ 27013645 (+) | False | LOC113540685 |
| XM_026936094.2 | mRNA | downstream | 47115 | 27265570 ~ 27270794 (+) | True | LOC113539951 |
| XM_034303330.1 | mRNA | downstream | 55717 | 27274172 ~ 27286654 (+) | True | LOC113539841 |
| XM_026935910.2 | mRNA | downstream | 55717 | 27274172 ~ 27283729 (+) | False | LOC113539841 |
| XM_026937006.2 | mRNA | downstream | 94622 | 27313077 ~ 27318012 (+) | True | LOC113540484 |
| XM_026936714.2 | mRNA | downstream | 107296 | 27325751 ~ 27371031 (+) | True | pde4bb |
| XR_003404108.2 | other | upstream | 104973 | 27113148 ~ 27113254 (+) | True | LOC113540738 |
| XR_003404105.1 | other | upstream | 554145 | 26663971 ~ 26664082 (+) | True | LOC113540735 |
| TU84616 | other | upstream | 842448 | 26353189 ~ 26375779 (+) | True | LOC117597079 |
| TU84618 | other | upstream | 853994 | 26353189 ~ 26364233 (+) | False | LOC117597079 |
| XR_003404060.2 | other | upstream | 925443 | 26288294 ~ 26292784 (+) | False | zgc:66427 |
| trnat-ugu_5 | other | downstream | 270798 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
| XR_003404069.1 | other | downstream | 338062 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
| XR_003404070.2 | other | downstream | 339310 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| trnat-ugu_6 | other | downstream | 402150 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| trnat-ugu_8 | other | downstream | 402856 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
