Item | Value |
---|---|
RNA id | TU85491 |
length | 1251 |
lncRNA type | inter_gene |
GC content | 0.41 |
exon number | 3 |
gene id | LOC113540592 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 27556085 ~ 27559427 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU85494 | lncRNA | upstream | 498 | 27553127 ~ 27555706 (+) | True | G72118 |
XR_003404004.2 | lncRNA | upstream | 68493 | 27483820 ~ 27487711 (+) | True | LOC113540179 |
XR_003404003.2 | lncRNA | upstream | 68493 | 27483831 ~ 27487711 (+) | False | LOC113540179 |
TU85362 | lncRNA | upstream | 96007 | 27459670 ~ 27460197 (+) | True | G72012 |
TU85353 | lncRNA | upstream | 126982 | 27428419 ~ 27429222 (+) | True | G72005 |
TU85626 | lncRNA | downstream | 452642 | 28011744 ~ 28012459 (+) | True | G72236 |
TU85674 | lncRNA | downstream | 555349 | 28114451 ~ 28122142 (+) | True | G72276 |
TU85711 | lncRNA | downstream | 743749 | 28302851 ~ 28383408 (+) | False | insig1 |
TU85733 | lncRNA | downstream | 757302 | 28316404 ~ 28328181 (+) | False | htr5ab |
TU85742 | lncRNA | downstream | 909846 | 28468948 ~ 28471765 (+) | True | G72336 |
XM_034303993.1 | mRNA | upstream | 10075 | 27534676 ~ 27546129 (+) | True | ap2m1a |
XM_026936183.2 | mRNA | upstream | 39000 | 27509850 ~ 27517204 (+) | True | si:ch211-252f13.5 |
XM_026935807.2 | mRNA | upstream | 48005 | 27495848 ~ 27508199 (+) | True | abi1b |
XM_026935808.2 | mRNA | upstream | 48005 | 27495848 ~ 27508199 (+) | False | abi1b |
XM_026936475.2 | mRNA | upstream | 78531 | 27468283 ~ 27477673 (+) | False | zgc:55943 |
XM_034304070.1 | mRNA | downstream | 3047 | 27562149 ~ 27582022 (+) | True | dvl3a |
XM_026936880.2 | mRNA | downstream | 69346 | 27628448 ~ 27639961 (+) | True | prtfdc1b |
XM_034303530.1 | mRNA | downstream | 89712 | 27648814 ~ 27698656 (+) | True | arhgap21b |
XM_034303531.1 | mRNA | downstream | 89712 | 27648814 ~ 27698656 (+) | False | arhgap21b |
XM_034303532.1 | mRNA | downstream | 89712 | 27648814 ~ 27698656 (+) | False | arhgap21b |
trnat-ugu_5 | other | upstream | 66879 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
XR_003404108.2 | other | upstream | 442950 | 27113148 ~ 27113254 (+) | True | LOC113540738 |
XR_003404105.1 | other | upstream | 892122 | 26663971 ~ 26664082 (+) | True | LOC113540735 |
TU84616 | other | upstream | 1180425 | 26353189 ~ 26375779 (+) | True | LOC117597079 |
trnat-ugu_6 | other | downstream | 61503 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
trnat-ugu_8 | other | downstream | 62209 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
TU86406 | other | downstream | 1315254 | 28874356 ~ 28912104 (+) | True | G72873 |
TU86682 | other | downstream | 2060891 | 29619993 ~ 29623037 (+) | False | asip2b |
TU87615 | other | downstream | 3187029 | 30746131 ~ 30767132 (+) | True | G73944 |