Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU85849 |
| length | 261 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G72428 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28658276 ~ 28658536 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85843 | lncRNA | upstream | 6655 | 28651414 ~ 28651621 (+) | True | G72422 |
| TU85820 | lncRNA | upstream | 21075 | 28619824 ~ 28637201 (+) | True | G72404 |
| TU85824 | lncRNA | upstream | 30303 | 28623240 ~ 28627973 (+) | True | G72408 |
| TU85789 | lncRNA | upstream | 79326 | 28574922 ~ 28578950 (+) | True | G72378 |
| TU85742 | lncRNA | upstream | 186511 | 28468948 ~ 28471765 (+) | True | G72336 |
| TU85891 | lncRNA | downstream | 100019 | 28758555 ~ 28761451 (+) | False | gng5 |
| TU85895 | lncRNA | downstream | 129081 | 28787617 ~ 28791836 (+) | True | G72472 |
| TU86346 | lncRNA | downstream | 134311 | 28792847 ~ 28797137 (+) | False | selenot1a |
| TU86397 | lncRNA | downstream | 203880 | 28862416 ~ 28901261 (+) | True | G72869 |
| TU86402 | lncRNA | downstream | 215067 | 28873603 ~ 28873988 (+) | True | G72872 |
| XM_034303288.1 | mRNA | upstream | 47119 | 28602905 ~ 28611157 (+) | False | LOC113540233 |
| XM_034303287.1 | mRNA | upstream | 47119 | 28605823 ~ 28611157 (+) | True | LOC113540233 |
| XM_026936573.2 | mRNA | upstream | 47119 | 28605823 ~ 28611157 (+) | False | LOC113540233 |
| XM_026936568.2 | mRNA | upstream | 69657 | 28558278 ~ 28588619 (+) | True | rnf32 |
| XM_026936875.2 | mRNA | downstream | 32560 | 28691096 ~ 28699416 (+) | True | aldh9a1b |
| XM_026936340.2 | mRNA | downstream | 57728 | 28716264 ~ 28722857 (+) | True | fzr1b |
| XM_026937211.2 | mRNA | downstream | 80590 | 28739126 ~ 28745646 (+) | False | si:ch73-344o19.1 |
| XM_026937212.2 | mRNA | downstream | 80591 | 28739127 ~ 28745646 (+) | True | si:ch73-344o19.1 |
| XM_026935934.2 | mRNA | downstream | 100009 | 28758545 ~ 28761448 (+) | True | gng5 |
| trnat-ugu_8 | other | upstream | 1036893 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
| trnat-ugu_6 | other | upstream | 1037599 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| XR_003404070.2 | other | upstream | 1100374 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| XR_003404069.1 | other | upstream | 1101628 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
| trnat-ugu_5 | other | upstream | 1168951 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
| TU86406 | other | downstream | 215820 | 28874356 ~ 28912104 (+) | True | G72873 |
| TU86682 | other | downstream | 961457 | 29619993 ~ 29623037 (+) | False | asip2b |
| TU87615 | other | downstream | 2087595 | 30746131 ~ 30767132 (+) | True | G73944 |
| TU87616 | other | downstream | 2087595 | 30746131 ~ 30767132 (+) | False | G73944 |
| TU87706 | other | downstream | 2403194 | 31061730 ~ 31097888 (+) | False | spsb4a |
