Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026935934.2 |
| length | 772 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | gng5 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28758545 ~ 28761451 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0006334 | nucleosome assembly | biological_process |
| GO:0000786 | nucleosome | cellular_component |
| GO:0005834 | heterotrimeric G-protein complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| K04542 | GNG5; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85849 | lncRNA | upstream | 100009 | 28658276 ~ 28658536 (+) | True | G72428 |
| TU85843 | lncRNA | upstream | 106924 | 28651414 ~ 28651621 (+) | True | G72422 |
| TU85820 | lncRNA | upstream | 121344 | 28619824 ~ 28637201 (+) | True | G72404 |
| TU85824 | lncRNA | upstream | 130572 | 28623240 ~ 28627973 (+) | True | G72408 |
| TU85789 | lncRNA | upstream | 179595 | 28574922 ~ 28578950 (+) | True | G72378 |
| TU85895 | lncRNA | downstream | 26169 | 28787617 ~ 28791836 (+) | True | G72472 |
| TU86346 | lncRNA | downstream | 31399 | 28792847 ~ 28797137 (+) | False | selenot1a |
| TU86397 | lncRNA | downstream | 100968 | 28862416 ~ 28901261 (+) | True | G72869 |
| TU86402 | lncRNA | downstream | 112155 | 28873603 ~ 28873988 (+) | True | G72872 |
| TU86425 | lncRNA | downstream | 153181 | 28914629 ~ 28915189 (+) | True | G72889 |
| XM_026937211.2 | mRNA | upstream | 12899 | 28739126 ~ 28745646 (+) | False | si:ch73-344o19.1 |
| XM_026937212.2 | mRNA | upstream | 12899 | 28739127 ~ 28745646 (+) | True | si:ch73-344o19.1 |
| XM_026936340.2 | mRNA | upstream | 35688 | 28716264 ~ 28722857 (+) | True | fzr1b |
| XM_026936875.2 | mRNA | upstream | 59129 | 28691096 ~ 28699416 (+) | True | aldh9a1b |
| XM_026936935.2 | mRNA | upstream | 91914 | 28654756 ~ 28666631 (+) | True | slc1a7a |
| XM_026936491.2 | mRNA | downstream | 18301 | 28779749 ~ 28784107 (+) | True | otol1a |
| XM_034303989.1 | mRNA | downstream | 18301 | 28779749 ~ 28784107 (+) | False | otol1a |
| XM_026936511.2 | mRNA | downstream | 31405 | 28792853 ~ 28797159 (+) | True | selenot1a |
| XM_034304057.1 | mRNA | downstream | 52635 | 28814083 ~ 28823502 (+) | True | zgc:153615 |
| XM_026936510.2 | mRNA | downstream | 52635 | 28814083 ~ 28823502 (+) | False | zgc:153615 |
| trnat-ugu_8 | other | upstream | 1137162 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
| trnat-ugu_6 | other | upstream | 1137868 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| XR_003404070.2 | other | upstream | 1200643 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| XR_003404069.1 | other | upstream | 1201897 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
| trnat-ugu_5 | other | upstream | 1269220 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
| TU86406 | other | downstream | 112908 | 28874356 ~ 28912104 (+) | True | G72873 |
| TU86682 | other | downstream | 858545 | 29619993 ~ 29623037 (+) | False | asip2b |
| TU87615 | other | downstream | 1984683 | 30746131 ~ 30767132 (+) | True | G73944 |
| TU87616 | other | downstream | 1984683 | 30746131 ~ 30767132 (+) | False | G73944 |
| TU87706 | other | downstream | 2300282 | 31061730 ~ 31097888 (+) | False | spsb4a |
