Item | Value |
---|---|
RNA id | TU86397 |
length | 239 |
lncRNA type | read_through |
GC content | 0.29 |
exon number | 2 |
gene id | G72869 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 28862416 ~ 28901261 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU86346 | lncRNA | upstream | 65279 | 28792847 ~ 28797137 (+) | False | selenot1a |
TU85895 | lncRNA | upstream | 70580 | 28787617 ~ 28791836 (+) | True | G72472 |
TU85891 | lncRNA | upstream | 100965 | 28758555 ~ 28761451 (+) | False | gng5 |
TU85849 | lncRNA | upstream | 203880 | 28658276 ~ 28658536 (+) | True | G72428 |
TU85843 | lncRNA | upstream | 210795 | 28651414 ~ 28651621 (+) | True | G72422 |
TU86425 | lncRNA | downstream | 13368 | 28914629 ~ 28915189 (+) | True | G72889 |
TU86423 | lncRNA | downstream | 13522 | 28914783 ~ 28915258 (+) | False | G72889 |
TU86429 | lncRNA | downstream | 16481 | 28917742 ~ 28918398 (+) | True | G72892 |
TU86452 | lncRNA | downstream | 29815 | 28931076 ~ 28931398 (+) | True | G72910 |
TU86455 | lncRNA | downstream | 32722 | 28933983 ~ 28934309 (+) | True | G72913 |
XM_026936512.2 | mRNA | upstream | 19654 | 28832373 ~ 28842762 (+) | True | txndc12 |
XM_026936513.2 | mRNA | upstream | 30688 | 28827952 ~ 28831728 (+) | True | LOC113540201 |
XM_034304057.1 | mRNA | upstream | 38914 | 28814083 ~ 28823502 (+) | True | zgc:153615 |
XM_026936510.2 | mRNA | upstream | 38914 | 28814083 ~ 28823502 (+) | False | zgc:153615 |
XM_026936511.2 | mRNA | upstream | 65257 | 28792853 ~ 28797159 (+) | True | selenot1a |
XM_034303522.1 | mRNA | downstream | 269 | 28901530 ~ 28906396 (+) | True | LOC117597035 |
XM_026936508.2 | mRNA | downstream | 22350 | 28923611 ~ 28930532 (+) | True | cope |
XM_034303336.1 | mRNA | downstream | 39413 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
XM_034303341.1 | mRNA | downstream | 39413 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
XM_034303338.1 | mRNA | downstream | 39413 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
trnat-ugu_8 | other | upstream | 1241033 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
trnat-ugu_6 | other | upstream | 1241739 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
XR_003404070.2 | other | upstream | 1304514 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
XR_003404069.1 | other | upstream | 1305768 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
trnat-ugu_5 | other | upstream | 1373091 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
TU86682 | other | downstream | 718732 | 29619993 ~ 29623037 (+) | False | asip2b |
TU87615 | other | downstream | 1844870 | 30746131 ~ 30767132 (+) | True | G73944 |
TU87616 | other | downstream | 1844870 | 30746131 ~ 30767132 (+) | False | G73944 |
TU87706 | other | downstream | 2160469 | 31061730 ~ 31097888 (+) | False | spsb4a |
TU87898 | other | downstream | 2450000 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |