Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86402 |
| length | 362 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G72872 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28873603 ~ 28873988 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86346 | lncRNA | upstream | 76466 | 28792847 ~ 28797137 (+) | False | selenot1a |
| TU85895 | lncRNA | upstream | 81767 | 28787617 ~ 28791836 (+) | True | G72472 |
| TU85891 | lncRNA | upstream | 112152 | 28758555 ~ 28761451 (+) | False | gng5 |
| TU85849 | lncRNA | upstream | 215067 | 28658276 ~ 28658536 (+) | True | G72428 |
| TU85843 | lncRNA | upstream | 221982 | 28651414 ~ 28651621 (+) | True | G72422 |
| TU86425 | lncRNA | downstream | 40641 | 28914629 ~ 28915189 (+) | True | G72889 |
| TU86423 | lncRNA | downstream | 40795 | 28914783 ~ 28915258 (+) | False | G72889 |
| TU86429 | lncRNA | downstream | 43754 | 28917742 ~ 28918398 (+) | True | G72892 |
| TU86452 | lncRNA | downstream | 57088 | 28931076 ~ 28931398 (+) | True | G72910 |
| TU86455 | lncRNA | downstream | 59995 | 28933983 ~ 28934309 (+) | True | G72913 |
| XM_034303521.1 | mRNA | upstream | 5425 | 28863057 ~ 28868178 (+) | True | LOC117597034 |
| XM_026936512.2 | mRNA | upstream | 30841 | 28832373 ~ 28842762 (+) | True | txndc12 |
| XM_026936513.2 | mRNA | upstream | 41875 | 28827952 ~ 28831728 (+) | True | LOC113540201 |
| XM_034304057.1 | mRNA | upstream | 50101 | 28814083 ~ 28823502 (+) | True | zgc:153615 |
| XM_026936510.2 | mRNA | upstream | 50101 | 28814083 ~ 28823502 (+) | False | zgc:153615 |
| XM_034303853.1 | mRNA | downstream | 11163 | 28885151 ~ 28887556 (+) | True | LOC117597120 |
| XM_034303522.1 | mRNA | downstream | 27542 | 28901530 ~ 28906396 (+) | True | LOC117597035 |
| XM_026936508.2 | mRNA | downstream | 49623 | 28923611 ~ 28930532 (+) | True | cope |
| XM_034303336.1 | mRNA | downstream | 66686 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303341.1 | mRNA | downstream | 66686 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| trnat-ugu_8 | other | upstream | 1252220 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
| trnat-ugu_6 | other | upstream | 1252926 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| XR_003404070.2 | other | upstream | 1315701 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| XR_003404069.1 | other | upstream | 1316955 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
| trnat-ugu_5 | other | upstream | 1384278 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
| TU86406 | other | downstream | 368 | 28874356 ~ 28912104 (+) | True | G72873 |
| TU86682 | other | downstream | 746005 | 29619993 ~ 29623037 (+) | False | asip2b |
| TU87615 | other | downstream | 1872143 | 30746131 ~ 30767132 (+) | True | G73944 |
| TU87616 | other | downstream | 1872143 | 30746131 ~ 30767132 (+) | False | G73944 |
| TU87706 | other | downstream | 2187742 | 31061730 ~ 31097888 (+) | False | spsb4a |
