Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86425 |
| length | 561 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G72889 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28914629 ~ 28915258 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86397 | lncRNA | upstream | 13368 | 28862416 ~ 28901261 (+) | True | G72869 |
| TU86402 | lncRNA | upstream | 40641 | 28873603 ~ 28873988 (+) | True | G72872 |
| TU86346 | lncRNA | upstream | 117492 | 28792847 ~ 28797137 (+) | False | selenot1a |
| TU85895 | lncRNA | upstream | 122793 | 28787617 ~ 28791836 (+) | True | G72472 |
| TU85891 | lncRNA | upstream | 153178 | 28758555 ~ 28761451 (+) | False | gng5 |
| TU86429 | lncRNA | downstream | 2553 | 28917742 ~ 28918398 (+) | True | G72892 |
| TU86452 | lncRNA | downstream | 15887 | 28931076 ~ 28931398 (+) | True | G72910 |
| TU86455 | lncRNA | downstream | 18794 | 28933983 ~ 28934309 (+) | True | G72913 |
| TU86462 | lncRNA | downstream | 138297 | 29053486 ~ 29054218 (+) | True | G72917 |
| TU86528 | lncRNA | downstream | 266578 | 29181767 ~ 29196118 (+) | False | fubp1 |
| XM_034303522.1 | mRNA | upstream | 8233 | 28901530 ~ 28906396 (+) | True | LOC117597035 |
| XM_034303853.1 | mRNA | upstream | 27073 | 28885151 ~ 28887556 (+) | True | LOC117597120 |
| XM_034303521.1 | mRNA | upstream | 46451 | 28863057 ~ 28868178 (+) | True | LOC117597034 |
| XM_026936512.2 | mRNA | upstream | 71867 | 28832373 ~ 28842762 (+) | True | txndc12 |
| XM_026936513.2 | mRNA | upstream | 82901 | 28827952 ~ 28831728 (+) | True | LOC113540201 |
| XM_026936508.2 | mRNA | downstream | 8422 | 28923611 ~ 28930532 (+) | True | cope |
| XM_034303336.1 | mRNA | downstream | 25485 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303341.1 | mRNA | downstream | 25485 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303338.1 | mRNA | downstream | 25485 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303339.1 | mRNA | downstream | 25485 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| TU86406 | other | upstream | 2525 | 28874356 ~ 28912104 (+) | True | G72873 |
| trnat-ugu_8 | other | upstream | 1293246 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
| trnat-ugu_6 | other | upstream | 1293952 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| XR_003404070.2 | other | upstream | 1356727 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| XR_003404069.1 | other | upstream | 1357981 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
| TU86682 | other | downstream | 704804 | 29619993 ~ 29623037 (+) | False | asip2b |
| TU87615 | other | downstream | 1830942 | 30746131 ~ 30767132 (+) | True | G73944 |
| TU87616 | other | downstream | 1830942 | 30746131 ~ 30767132 (+) | False | G73944 |
| TU87706 | other | downstream | 2146541 | 31061730 ~ 31097888 (+) | False | spsb4a |
| TU87898 | other | downstream | 2436072 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |
