Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86462 |
| length | 733 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G72917 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29053486 ~ 29054218 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86455 | lncRNA | upstream | 119177 | 28933983 ~ 28934309 (+) | True | G72913 |
| TU86452 | lncRNA | upstream | 122088 | 28931076 ~ 28931398 (+) | True | G72910 |
| TU86429 | lncRNA | upstream | 135088 | 28917742 ~ 28918398 (+) | True | G72892 |
| TU86423 | lncRNA | upstream | 138228 | 28914783 ~ 28915258 (+) | False | G72889 |
| TU86425 | lncRNA | upstream | 138297 | 28914629 ~ 28915189 (+) | True | G72889 |
| TU86528 | lncRNA | downstream | 127549 | 29181767 ~ 29196118 (+) | False | fubp1 |
| TU86551 | lncRNA | downstream | 244917 | 29299135 ~ 29301133 (+) | True | G73000 |
| TU86633 | lncRNA | downstream | 429044 | 29483262 ~ 29524242 (+) | True | G73072 |
| TU86630 | lncRNA | downstream | 464890 | 29519108 ~ 29521022 (+) | True | G73069 |
| TU86649 | lncRNA | downstream | 470080 | 29524298 ~ 29524836 (+) | True | G73088 |
| XM_034303336.1 | mRNA | upstream | 10491 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303341.1 | mRNA | upstream | 10491 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303338.1 | mRNA | upstream | 10491 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303339.1 | mRNA | upstream | 10491 | 28940674 ~ 29042995 (+) | False | st6galnac5a |
| XM_034303337.1 | mRNA | upstream | 10491 | 28945159 ~ 29042995 (+) | False | st6galnac5a |
| XM_026936490.2 | mRNA | downstream | 25966 | 29080184 ~ 29128564 (+) | True | ak5 |
| XM_026936489.2 | mRNA | downstream | 118538 | 29172756 ~ 29184256 (+) | False | miga1 |
| XM_026936488.2 | mRNA | downstream | 118538 | 29172756 ~ 29184256 (+) | True | miga1 |
| XM_026936485.2 | mRNA | downstream | 131207 | 29185425 ~ 29196149 (+) | True | fubp1 |
| XM_034303613.1 | mRNA | downstream | 131207 | 29185425 ~ 29196149 (+) | False | fubp1 |
| TU86406 | other | upstream | 141382 | 28874356 ~ 28912104 (+) | True | G72873 |
| trnat-ugu_8 | other | upstream | 1432103 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
| trnat-ugu_6 | other | upstream | 1432809 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| XR_003404070.2 | other | upstream | 1495584 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| XR_003404069.1 | other | upstream | 1496838 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
| TU86682 | other | downstream | 565775 | 29619993 ~ 29623037 (+) | False | asip2b |
| TU87615 | other | downstream | 1691913 | 30746131 ~ 30767132 (+) | True | G73944 |
| TU87616 | other | downstream | 1691913 | 30746131 ~ 30767132 (+) | False | G73944 |
| TU87706 | other | downstream | 2007512 | 31061730 ~ 31097888 (+) | False | spsb4a |
| TU87898 | other | downstream | 2297043 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |
