Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86818 |
| length | 897 |
| lncRNA type | read_through |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G73247 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29128055 ~ 29196167 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86819 | lncRNA | downstream | 73828 | 29053597 ~ 29054227 (-) | True | G73248 |
| TU86836 | lncRNA | downstream | 84085 | 29043760 ~ 29043970 (-) | True | G73264 |
| XR_004577953.1 | lncRNA | downstream | 98864 | 29013240 ~ 29029191 (-) | False | LOC113540203 |
| XR_004577955.1 | lncRNA | downstream | 98864 | 29015014 ~ 29029191 (-) | True | LOC113540203 |
| XR_004577954.1 | lncRNA | downstream | 98864 | 29027665 ~ 29029191 (-) | False | LOC113540203 |
| TU86892 | lncRNA | upstream | 17386 | 29213553 ~ 29215051 (-) | True | G73318 |
| TU86893 | lncRNA | upstream | 20103 | 29216270 ~ 29218158 (-) | True | G73319 |
| TU86901 | lncRNA | upstream | 77422 | 29273589 ~ 29320334 (-) | True | G73327 |
| TU87006 | lncRNA | upstream | 343928 | 29540095 ~ 29540356 (-) | True | G73423 |
| TU87022 | lncRNA | upstream | 411434 | 29607601 ~ 29607805 (-) | True | G73439 |
| XM_026936498.2 | mRNA | downstream | 50619 | 29055012 ~ 29077436 (-) | True | pigk |
| XM_034303525.1 | mRNA | downstream | 209903 | 28913679 ~ 28918152 (-) | True | LOC113540041 |
| XM_034303523.1 | mRNA | downstream | 209906 | 28911613 ~ 28918149 (-) | False | LOC113540041 |
| XM_034303526.1 | mRNA | downstream | 247853 | 28877573 ~ 28880202 (-) | True | LOC117597036 |
| XM_034303527.1 | mRNA | downstream | 251152 | 28873579 ~ 28876903 (-) | False | LOC117597037 |
| XM_034304142.1 | mRNA | upstream | 104139 | 29300306 ~ 29322917 (-) | False | dipk2aa |
| XM_034304140.1 | mRNA | upstream | 104139 | 29300306 ~ 29322917 (-) | False | dipk2aa |
| XM_034304141.1 | mRNA | upstream | 104139 | 29300306 ~ 29322917 (-) | True | dipk2aa |
| XM_026936180.2 | mRNA | upstream | 136952 | 29333119 ~ 29336703 (-) | True | chst2a |
| XM_034303445.1 | mRNA | upstream | 163333 | 29359500 ~ 29371526 (-) | True | pcolce2a |
| XR_004577982.1 | other | downstream | 243090 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | downstream | 243090 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577984.1 | other | downstream | 245891 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004578096.1 | other | downstream | 475630 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| trnas-uga_2 | other | downstream | 891250 | 28236724 ~ 28236805 (-) | True | trnas-uga_2 |
| XR_003404076.1 | other | upstream | 327227 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
| XR_003404072.2 | other | upstream | 327556 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| XR_003404071.2 | other | upstream | 328342 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| XR_003404077.1 | other | upstream | 328822 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404065.2 | other | upstream | 368435 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
