Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86836 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G73264 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29043760 ~ 29043970 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404005.2 | lncRNA | downstream | 14569 | 28941049 ~ 29029191 (-) | False | LOC113540203 |
| XR_004577953.1 | lncRNA | downstream | 14569 | 29013240 ~ 29029191 (-) | False | LOC113540203 |
| XR_004577955.1 | lncRNA | downstream | 14569 | 29015014 ~ 29029191 (-) | True | LOC113540203 |
| XR_004577954.1 | lncRNA | downstream | 14569 | 29027665 ~ 29029191 (-) | False | LOC113540203 |
| TU86785 | lncRNA | downstream | 14573 | 28940662 ~ 29029187 (-) | False | LOC113540203 |
| TU86819 | lncRNA | upstream | 9627 | 29053597 ~ 29054227 (-) | True | G73248 |
| TU86818 | lncRNA | upstream | 84085 | 29128055 ~ 29196167 (-) | True | G73247 |
| TU86820 | lncRNA | upstream | 144188 | 29188158 ~ 29189340 (-) | True | G73249 |
| TU86821 | lncRNA | upstream | 144646 | 29188616 ~ 29189340 (-) | False | G73249 |
| TU86892 | lncRNA | upstream | 169583 | 29213553 ~ 29215051 (-) | True | G73318 |
| XM_034303525.1 | mRNA | downstream | 125608 | 28913679 ~ 28918152 (-) | True | LOC113540041 |
| XM_034303523.1 | mRNA | downstream | 125611 | 28911613 ~ 28918149 (-) | False | LOC113540041 |
| XM_034303526.1 | mRNA | downstream | 163558 | 28877573 ~ 28880202 (-) | True | LOC117597036 |
| XM_034303527.1 | mRNA | downstream | 166857 | 28873579 ~ 28876903 (-) | False | LOC117597037 |
| XM_026936503.2 | mRNA | downstream | 182317 | 28842922 ~ 28861443 (-) | True | gipc2 |
| XM_026936498.2 | mRNA | upstream | 11042 | 29055012 ~ 29077436 (-) | True | pigk |
| XM_026936482.2 | mRNA | upstream | 87216 | 29131186 ~ 29147492 (-) | False | zzz3 |
| XM_026936483.2 | mRNA | upstream | 87216 | 29131186 ~ 29147359 (-) | True | zzz3 |
| XM_034303995.1 | mRNA | upstream | 106551 | 29150521 ~ 29171921 (-) | True | usp33 |
| XM_034304142.1 | mRNA | upstream | 256336 | 29300306 ~ 29322917 (-) | False | dipk2aa |
| XR_004577982.1 | other | downstream | 158795 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | downstream | 158795 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577984.1 | other | downstream | 161596 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004578096.1 | other | downstream | 391335 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| trnas-uga_2 | other | downstream | 806955 | 28236724 ~ 28236805 (-) | True | trnas-uga_2 |
| TU86878 | other | upstream | 104668 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_003404076.1 | other | upstream | 479424 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
| XR_003404072.2 | other | upstream | 479753 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| XR_003404071.2 | other | upstream | 480539 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| XR_003404077.1 | other | upstream | 481019 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
