Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86892 |
| length | 1240 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G73318 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29213553 ~ 29215051 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86818 | lncRNA | downstream | 17386 | 29128055 ~ 29196167 (-) | True | G73247 |
| TU86820 | lncRNA | downstream | 24213 | 29188158 ~ 29189340 (-) | True | G73249 |
| TU86821 | lncRNA | downstream | 24213 | 29188616 ~ 29189340 (-) | False | G73249 |
| TU86819 | lncRNA | downstream | 159326 | 29053597 ~ 29054227 (-) | True | G73248 |
| TU86836 | lncRNA | downstream | 169583 | 29043760 ~ 29043970 (-) | True | G73264 |
| TU86893 | lncRNA | upstream | 1219 | 29216270 ~ 29218158 (-) | True | G73319 |
| TU86901 | lncRNA | upstream | 58538 | 29273589 ~ 29320334 (-) | True | G73327 |
| TU87006 | lncRNA | upstream | 325044 | 29540095 ~ 29540356 (-) | True | G73423 |
| TU87022 | lncRNA | upstream | 392550 | 29607601 ~ 29607805 (-) | True | G73439 |
| TU87036 | lncRNA | upstream | 456136 | 29671187 ~ 29674270 (-) | True | G73452 |
| XM_034303995.1 | mRNA | downstream | 41632 | 29150521 ~ 29171921 (-) | True | usp33 |
| XM_026936482.2 | mRNA | downstream | 66061 | 29131186 ~ 29147492 (-) | False | zzz3 |
| XM_026936483.2 | mRNA | downstream | 66194 | 29131186 ~ 29147359 (-) | True | zzz3 |
| XM_026936498.2 | mRNA | downstream | 136117 | 29055012 ~ 29077436 (-) | True | pigk |
| XM_034303525.1 | mRNA | downstream | 295401 | 28913679 ~ 28918152 (-) | True | LOC113540041 |
| XM_034304142.1 | mRNA | upstream | 85255 | 29300306 ~ 29322917 (-) | False | dipk2aa |
| XM_034304140.1 | mRNA | upstream | 85255 | 29300306 ~ 29322917 (-) | False | dipk2aa |
| XM_034304141.1 | mRNA | upstream | 85255 | 29300306 ~ 29322917 (-) | True | dipk2aa |
| XM_026936180.2 | mRNA | upstream | 118068 | 29333119 ~ 29336703 (-) | True | chst2a |
| XM_034303445.1 | mRNA | upstream | 144449 | 29359500 ~ 29371526 (-) | True | pcolce2a |
| TU86878 | other | downstream | 61172 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_004577982.1 | other | downstream | 328588 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | downstream | 328588 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577984.1 | other | downstream | 331389 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004578096.1 | other | downstream | 561128 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| XR_003404076.1 | other | upstream | 308343 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
| XR_003404072.2 | other | upstream | 308672 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| XR_003404071.2 | other | upstream | 309458 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| XR_003404077.1 | other | upstream | 309938 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404065.2 | other | upstream | 349551 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
