Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU86901 |
| length | 370 |
| lncRNA type | sense_over |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G73327 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29273589 ~ 29320334 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86893 | lncRNA | downstream | 55431 | 29216270 ~ 29218158 (-) | True | G73319 |
| TU86892 | lncRNA | downstream | 58538 | 29213553 ~ 29215051 (-) | True | G73318 |
| TU86818 | lncRNA | downstream | 77422 | 29128055 ~ 29196167 (-) | True | G73247 |
| TU86820 | lncRNA | downstream | 84249 | 29188158 ~ 29189340 (-) | True | G73249 |
| TU86821 | lncRNA | downstream | 84249 | 29188616 ~ 29189340 (-) | False | G73249 |
| TU87006 | lncRNA | upstream | 219761 | 29540095 ~ 29540356 (-) | True | G73423 |
| TU87022 | lncRNA | upstream | 287267 | 29607601 ~ 29607805 (-) | True | G73439 |
| TU87036 | lncRNA | upstream | 350853 | 29671187 ~ 29674270 (-) | True | G73452 |
| TU87041 | lncRNA | upstream | 390752 | 29711086 ~ 29712194 (-) | True | G73457 |
| TU87042 | lncRNA | upstream | 392559 | 29712893 ~ 29713446 (-) | True | G73458 |
| XM_034303995.1 | mRNA | downstream | 101668 | 29150521 ~ 29171921 (-) | True | usp33 |
| XM_026936482.2 | mRNA | downstream | 126097 | 29131186 ~ 29147492 (-) | False | zzz3 |
| XM_026936483.2 | mRNA | downstream | 126230 | 29131186 ~ 29147359 (-) | True | zzz3 |
| XM_026936498.2 | mRNA | downstream | 196153 | 29055012 ~ 29077436 (-) | True | pigk |
| XM_034303525.1 | mRNA | downstream | 355437 | 28913679 ~ 28918152 (-) | True | LOC113540041 |
| XM_026936180.2 | mRNA | upstream | 12785 | 29333119 ~ 29336703 (-) | True | chst2a |
| XM_034303445.1 | mRNA | upstream | 39166 | 29359500 ~ 29371526 (-) | True | pcolce2a |
| XM_026936950.2 | mRNA | upstream | 39166 | 29359500 ~ 29371522 (-) | False | pcolce2a |
| XM_026937224.2 | mRNA | upstream | 121781 | 29442115 ~ 29452793 (-) | True | mfsd8l2 |
| XM_034303512.1 | mRNA | upstream | 140707 | 29461041 ~ 29466020 (-) | True | kcnmb2 |
| TU86878 | other | downstream | 121208 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_004577982.1 | other | downstream | 388624 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | downstream | 388624 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577984.1 | other | downstream | 391425 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004578096.1 | other | downstream | 621164 | 28648324 ~ 28652425 (-) | False | LOC113540437 |
| XR_003404076.1 | other | upstream | 203060 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
| XR_003404072.2 | other | upstream | 203389 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| XR_003404071.2 | other | upstream | 204175 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| XR_003404077.1 | other | upstream | 204655 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404065.2 | other | upstream | 244268 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
