Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87071 |
| length | 354 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G73485 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29792212 ~ 29793644 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87065 | lncRNA | downstream | 12080 | 29778555 ~ 29780132 (-) | True | G73481 |
| TU87028 | lncRNA | downstream | 26097 | 29765747 ~ 29766115 (-) | True | G73444 |
| TU87032 | lncRNA | downstream | 26580 | 29765124 ~ 29765632 (-) | True | G73448 |
| TU87063 | lncRNA | downstream | 28421 | 29763505 ~ 29763791 (-) | True | G73479 |
| TU87043 | lncRNA | downstream | 77802 | 29713999 ~ 29714410 (-) | True | G73459 |
| TU87081 | lncRNA | upstream | 53030 | 29846674 ~ 29846891 (-) | True | G73492 |
| TU87217 | lncRNA | upstream | 135620 | 29929264 ~ 29929489 (-) | True | G73607 |
| TU87230 | lncRNA | upstream | 183027 | 29976671 ~ 30025036 (-) | True | G73618 |
| TU87275 | lncRNA | upstream | 302146 | 30095790 ~ 30097973 (-) | True | G73652 |
| TU87279 | lncRNA | upstream | 307796 | 30101440 ~ 30102870 (-) | True | G73656 |
| XM_026936015.2 | mRNA | downstream | 44099 | 29732265 ~ 29748113 (-) | True | cdc14aa |
| XM_026935844.2 | mRNA | downstream | 61356 | 29724588 ~ 29730856 (-) | False | zgc:110366 |
| XM_026935845.2 | mRNA | downstream | 61356 | 29724588 ~ 29730856 (-) | False | zgc:110366 |
| XM_026936229.2 | mRNA | downstream | 86530 | 29693378 ~ 29705682 (-) | True | si:ch211-13f8.1 |
| XM_026937271.2 | mRNA | upstream | 3426 | 29797070 ~ 29812557 (-) | False | ddr2b |
| XM_026937270.2 | mRNA | upstream | 3426 | 29797070 ~ 29812557 (-) | False | ddr2b |
| XM_026937269.2 | mRNA | upstream | 3426 | 29797070 ~ 29812557 (-) | True | ddr2b |
| XM_026937272.2 | mRNA | upstream | 3426 | 29797070 ~ 29808991 (-) | False | ddr2b |
| XM_034304159.1 | mRNA | upstream | 3426 | 29797070 ~ 29807503 (-) | False | ddr2b |
| XR_003403975.2 | other | downstream | 61355 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| XR_003404065.2 | other | downstream | 216485 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003404077.1 | other | downstream | 267151 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404071.2 | other | downstream | 267525 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| XR_003404072.2 | other | downstream | 268300 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| TU87233 | other | upstream | 225862 | 30019506 ~ 30022525 (-) | True | G73619 |
| TU87613 | other | upstream | 948025 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
| TU87656 | other | upstream | 979819 | 30773463 ~ 30775819 (-) | True | ccl20l |
| LOC113540068 | other | upstream | 2073438 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| LOC117597010 | other | upstream | 2076874 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
