Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87200 |
| length | 481 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G73590 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 30150455 ~ 30192334 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87186 | lncRNA | upstream | 15590 | 30134652 ~ 30134865 (+) | True | G73578 |
| TU87184 | lncRNA | upstream | 19748 | 30130480 ~ 30130707 (+) | True | G73576 |
| TU87179 | lncRNA | upstream | 27205 | 30123023 ~ 30123250 (+) | True | G73571 |
| TU87176 | lncRNA | upstream | 31963 | 30118006 ~ 30118492 (+) | True | G73568 |
| TU87175 | lncRNA | upstream | 37825 | 30112389 ~ 30112630 (+) | True | G73567 |
| TU87379 | lncRNA | downstream | 285091 | 30477425 ~ 30478250 (+) | False | uggt1 |
| TU87380 | lncRNA | downstream | 285091 | 30477425 ~ 30478250 (+) | False | uggt1 |
| TU87498 | lncRNA | downstream | 289088 | 30481422 ~ 30481625 (+) | True | G73839 |
| TU87503 | lncRNA | downstream | 400816 | 30593150 ~ 30593609 (+) | True | G73844 |
| TU87504 | lncRNA | downstream | 400900 | 30593234 ~ 30593609 (+) | False | G73844 |
| XM_026937105.2 | mRNA | upstream | 40620 | 30097705 ~ 30109835 (+) | True | keap1a |
| XM_026937116.2 | mRNA | upstream | 99965 | 30045895 ~ 30050490 (+) | True | ebi3 |
| XM_034303701.1 | mRNA | upstream | 127884 | 30014655 ~ 30022571 (+) | True | blvra |
| XM_026936317.2 | mRNA | upstream | 149110 | 29998504 ~ 30001345 (+) | True | rgs13 |
| XM_026936318.2 | mRNA | upstream | 161020 | 29986185 ~ 29989435 (+) | True | rgs1 |
| XM_026937319.2 | mRNA | downstream | 7360 | 30199694 ~ 30204010 (+) | True | znf622 |
| XM_026937320.2 | mRNA | downstream | 7360 | 30199694 ~ 30203749 (+) | False | znf622 |
| XM_026936332.2 | mRNA | downstream | 12864 | 30205198 ~ 30211975 (+) | True | d2hgdh |
| XM_026937072.2 | mRNA | downstream | 32709 | 30225043 ~ 30237040 (+) | True | otomp |
| XM_026937167.2 | mRNA | downstream | 146536 | 30338870 ~ 30447632 (+) | True | hs6st1a |
| TU86682 | other | upstream | 527418 | 29619993 ~ 29623037 (+) | False | asip2b |
| TU86406 | other | upstream | 1238351 | 28874356 ~ 28912104 (+) | True | G72873 |
| trnat-ugu_8 | other | upstream | 2529072 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
| trnat-ugu_6 | other | upstream | 2529778 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
| XR_003404070.2 | other | upstream | 2592553 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
| TU87615 | other | downstream | 553797 | 30746131 ~ 30767132 (+) | True | G73944 |
| TU87616 | other | downstream | 553797 | 30746131 ~ 30767132 (+) | False | G73944 |
| TU87706 | other | downstream | 869396 | 31061730 ~ 31097888 (+) | False | spsb4a |
| TU87898 | other | downstream | 1158927 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |
| XR_004578111.1 | other | downstream | 1577488 | 31769822 ~ 31776798 (+) | True | LOC113540067 |
