Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87275 |
| length | 295 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G73652 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 30095790 ~ 30097973 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87230 | lncRNA | downstream | 70754 | 29976671 ~ 30025036 (-) | True | G73618 |
| TU87217 | lncRNA | downstream | 166301 | 29929264 ~ 29929489 (-) | True | G73607 |
| TU87081 | lncRNA | downstream | 248899 | 29846674 ~ 29846891 (-) | True | G73492 |
| TU87071 | lncRNA | downstream | 302146 | 29792212 ~ 29793644 (-) | True | G73485 |
| TU87065 | lncRNA | downstream | 315658 | 29778555 ~ 29780132 (-) | True | G73481 |
| TU87279 | lncRNA | upstream | 3467 | 30101440 ~ 30102870 (-) | True | G73656 |
| XR_004578005.1 | lncRNA | upstream | 30755 | 30128728 ~ 30138872 (-) | True | LOC113540631 |
| TU87298 | lncRNA | upstream | 88923 | 30186896 ~ 30191121 (-) | True | G73670 |
| TU87313 | lncRNA | upstream | 97706 | 30195679 ~ 30197576 (-) | True | G73684 |
| TU87486 | lncRNA | upstream | 379430 | 30477403 ~ 30478234 (-) | False | G73834 |
| XM_034303327.1 | mRNA | downstream | 10929 | 30064050 ~ 30084861 (-) | True | crlf1a |
| XM_034303448.1 | mRNA | downstream | 39070 | 30050560 ~ 30056720 (-) | True | odf3l2a |
| XM_026937101.2 | mRNA | downstream | 39382 | 30050560 ~ 30056408 (-) | False | odf3l2a |
| XM_026936237.2 | mRNA | downstream | 52779 | 30037408 ~ 30043011 (-) | False | LOC113540054 |
| XM_026936236.2 | mRNA | downstream | 52797 | 30037408 ~ 30042993 (-) | True | LOC113540054 |
| XM_026936328.2 | mRNA | upstream | 114416 | 30212389 ~ 30223320 (-) | False | acvr1l |
| XM_026936330.2 | mRNA | upstream | 114416 | 30212389 ~ 30223163 (-) | True | acvr1l |
| XM_034303540.1 | mRNA | upstream | 114416 | 30212389 ~ 30222759 (-) | False | acvr1l |
| XM_026936331.2 | mRNA | upstream | 117690 | 30215663 ~ 30223320 (-) | False | acvr1l |
| XM_034303822.1 | mRNA | upstream | 495733 | 30593706 ~ 30701045 (-) | True | epha4b |
| TU87233 | other | downstream | 73265 | 30019506 ~ 30022525 (-) | True | G73619 |
| XR_003403975.2 | other | downstream | 364933 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| XR_003404065.2 | other | downstream | 520063 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003404077.1 | other | downstream | 570729 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404071.2 | other | downstream | 571103 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| TU87613 | other | upstream | 643696 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
| TU87656 | other | upstream | 675490 | 30773463 ~ 30775819 (-) | True | ccl20l |
| LOC113540068 | other | upstream | 1769109 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| LOC117597010 | other | upstream | 1772545 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
| TU88351 | other | upstream | 1773186 | 31871159 ~ 31871639 (-) | False | LOC117597010 |
