Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87488 |
| length | 780 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G73834 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 30477403 ~ 30478234 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87313 | lncRNA | downstream | 279827 | 30195679 ~ 30197576 (-) | True | G73684 |
| TU87298 | lncRNA | downstream | 286282 | 30186896 ~ 30191121 (-) | True | G73670 |
| XR_004578005.1 | lncRNA | downstream | 338531 | 30128728 ~ 30138872 (-) | True | LOC113540631 |
| TU87279 | lncRNA | downstream | 374533 | 30101440 ~ 30102870 (-) | True | G73656 |
| TU87275 | lncRNA | downstream | 379430 | 30095790 ~ 30097973 (-) | True | G73652 |
| TU87654 | lncRNA | upstream | 291863 | 30770097 ~ 30771174 (-) | True | G73977 |
| TU87650 | lncRNA | upstream | 299525 | 30777759 ~ 30845482 (-) | True | G73974 |
| XR_003404008.2 | lncRNA | upstream | 358118 | 30836352 ~ 30838110 (-) | True | LOC113540224 |
| TU87738 | lncRNA | upstream | 552155 | 31030389 ~ 31031380 (-) | True | G74047 |
| TU87756 | lncRNA | upstream | 578251 | 31056485 ~ 31116436 (-) | True | G74060 |
| XM_026936328.2 | mRNA | downstream | 254083 | 30212389 ~ 30223320 (-) | False | acvr1l |
| XM_026936331.2 | mRNA | downstream | 254083 | 30215663 ~ 30223320 (-) | False | acvr1l |
| XM_026936330.2 | mRNA | downstream | 254240 | 30212389 ~ 30223163 (-) | True | acvr1l |
| XM_034303540.1 | mRNA | downstream | 254644 | 30212389 ~ 30222759 (-) | False | acvr1l |
| XM_034303327.1 | mRNA | downstream | 392542 | 30064050 ~ 30084861 (-) | True | crlf1a |
| XM_034303822.1 | mRNA | upstream | 115472 | 30593706 ~ 30701045 (-) | True | epha4b |
| XM_026937067.2 | mRNA | upstream | 242798 | 30721032 ~ 30724657 (-) | False | LOC113540512 |
| XM_026937066.2 | mRNA | upstream | 242798 | 30721032 ~ 30724657 (-) | True | LOC113540512 |
| XM_034303856.1 | mRNA | upstream | 263293 | 30741527 ~ 30750968 (-) | True | LOC113540055 |
| XM_026937106.2 | mRNA | upstream | 295215 | 30773449 ~ 30775702 (-) | False | ccl20l |
| TU87233 | other | downstream | 454878 | 30019506 ~ 30022525 (-) | True | G73619 |
| XR_003403975.2 | other | downstream | 746546 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| XR_003404065.2 | other | downstream | 901676 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003404077.1 | other | downstream | 952342 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404071.2 | other | downstream | 952716 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| TU87613 | other | upstream | 263435 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
| TU87656 | other | upstream | 295229 | 30773463 ~ 30775819 (-) | True | ccl20l |
| LOC113540068 | other | upstream | 1388848 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| LOC117597010 | other | upstream | 1392284 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
| TU88351 | other | upstream | 1392925 | 31871159 ~ 31871639 (-) | False | LOC117597010 |
