Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87613 |
| length | 596 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC113540055 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 30741527 ~ 30750968 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87486 | lncRNA | downstream | 263435 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87487 | lncRNA | downstream | 263435 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87488 | lncRNA | downstream | 263435 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87489 | lncRNA | downstream | 263435 | 30477403 ~ 30478234 (-) | True | G73834 |
| TU87490 | lncRNA | downstream | 263435 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87654 | lncRNA | upstream | 26271 | 30770097 ~ 30771174 (-) | True | G73977 |
| TU87650 | lncRNA | upstream | 33933 | 30777759 ~ 30845482 (-) | True | G73974 |
| XR_003404008.2 | lncRNA | upstream | 92526 | 30836352 ~ 30838110 (-) | True | LOC113540224 |
| TU87738 | lncRNA | upstream | 286563 | 31030389 ~ 31031380 (-) | True | G74047 |
| TU87756 | lncRNA | upstream | 312659 | 31056485 ~ 31116436 (-) | True | G74060 |
| XM_026937067.2 | mRNA | downstream | 17012 | 30721032 ~ 30724657 (-) | False | LOC113540512 |
| XM_026937066.2 | mRNA | downstream | 17012 | 30721032 ~ 30724657 (-) | True | LOC113540512 |
| XM_034303822.1 | mRNA | downstream | 40624 | 30593706 ~ 30701045 (-) | True | epha4b |
| XM_026936328.2 | mRNA | downstream | 518349 | 30212389 ~ 30223320 (-) | False | acvr1l |
| XM_026936331.2 | mRNA | downstream | 518349 | 30215663 ~ 30223320 (-) | False | acvr1l |
| XM_026937106.2 | mRNA | upstream | 29623 | 30773449 ~ 30775702 (-) | False | ccl20l |
| XM_026936925.2 | mRNA | upstream | 503234 | 31247060 ~ 31277249 (-) | True | rem2 |
| XM_034304133.1 | mRNA | upstream | 546995 | 31290821 ~ 31344984 (-) | False | carmil3 |
| XM_026937089.2 | mRNA | upstream | 546995 | 31290821 ~ 31344984 (-) | False | carmil3 |
| XM_026937088.2 | mRNA | upstream | 546995 | 31290821 ~ 31344984 (-) | True | carmil3 |
| TU87233 | other | downstream | 719144 | 30019506 ~ 30022525 (-) | True | G73619 |
| XR_003403975.2 | other | downstream | 1010812 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| XR_003404065.2 | other | downstream | 1165942 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003404077.1 | other | downstream | 1216608 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404071.2 | other | downstream | 1216982 | 29524509 ~ 29524687 (-) | True | LOC113540697 |
| TU87656 | other | upstream | 29637 | 30773463 ~ 30775819 (-) | True | ccl20l |
| LOC113540068 | other | upstream | 1123256 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| LOC117597010 | other | upstream | 1126692 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
| TU88351 | other | upstream | 1127333 | 31871159 ~ 31871639 (-) | False | LOC117597010 |
| TU88350 | other | upstream | 1130483 | 31874309 ~ 31874827 (-) | True | G74547 |
