Item | Value |
---|---|
RNA id | TU87625 |
length | 285 |
lncRNA type | inter_gene |
GC content | 0.52 |
exon number | 1 |
gene id | G73952 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 30772602 ~ 30772886 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU87604 | lncRNA | upstream | 49800 | 30721031 ~ 30722802 (+) | True | G73935 |
TU87503 | lncRNA | upstream | 178993 | 30593150 ~ 30593609 (+) | True | G73844 |
TU87504 | lncRNA | upstream | 178993 | 30593234 ~ 30593609 (+) | False | G73844 |
TU87498 | lncRNA | upstream | 290977 | 30481422 ~ 30481625 (+) | True | G73839 |
TU87379 | lncRNA | upstream | 294352 | 30477425 ~ 30478250 (+) | False | uggt1 |
TU87694 | lncRNA | downstream | 245225 | 31018111 ~ 31018474 (+) | True | G74011 |
TU87688 | lncRNA | downstream | 257502 | 31030388 ~ 31031370 (+) | True | G74006 |
TU87857 | lncRNA | downstream | 474204 | 31247090 ~ 31250757 (+) | True | G74158 |
TU87899 | lncRNA | downstream | 582668 | 31355554 ~ 31356121 (+) | True | G74199 |
XR_004578070.1 | lncRNA | downstream | 751217 | 31524103 ~ 31531196 (+) | True | LOC117597166 |
XM_034303971.1 | mRNA | upstream | 294309 | 30454757 ~ 30478293 (+) | True | uggt1 |
XM_026937167.2 | mRNA | upstream | 324970 | 30338870 ~ 30447632 (+) | True | hs6st1a |
XM_026937072.2 | mRNA | upstream | 535562 | 30225043 ~ 30237040 (+) | True | otomp |
XM_026936332.2 | mRNA | upstream | 560627 | 30205198 ~ 30211975 (+) | True | d2hgdh |
XM_026937320.2 | mRNA | upstream | 568853 | 30199694 ~ 30203749 (+) | False | znf622 |
XM_026936553.2 | mRNA | downstream | 8272 | 30781158 ~ 30845103 (+) | True | epha4a |
XM_026936554.2 | mRNA | downstream | 8272 | 30781158 ~ 30845103 (+) | False | epha4a |
XM_026936633.2 | mRNA | downstream | 232537 | 31005423 ~ 31028876 (+) | True | slc25a36a |
XM_026936134.2 | mRNA | downstream | 288851 | 31061737 ~ 31097929 (+) | True | spsb4a |
XM_026937114.2 | mRNA | downstream | 357221 | 31130107 ~ 31212333 (+) | False | clstn2 |
TU87615 | other | upstream | 5470 | 30746131 ~ 30767132 (+) | True | G73944 |
TU87616 | other | upstream | 5470 | 30746131 ~ 30767132 (+) | False | G73944 |
TU86682 | other | upstream | 1149565 | 29619993 ~ 29623037 (+) | False | asip2b |
TU86406 | other | upstream | 1860498 | 28874356 ~ 28912104 (+) | True | G72873 |
trnat-ugu_8 | other | upstream | 3151219 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
TU87706 | other | downstream | 288844 | 31061730 ~ 31097888 (+) | False | spsb4a |
TU87898 | other | downstream | 578375 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |
XR_004578111.1 | other | downstream | 996936 | 31769822 ~ 31776798 (+) | True | LOC113540067 |
LOC117597174 | other | downstream | 1173162 | 31946048 ~ 31946542 (+) | True | LOC117597174 |
LOC117597173 | other | downstream | 1186136 | 31959022 ~ 31959667 (+) | True | LOC117597173 |