Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87654 |
| length | 812 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G73977 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 30770097 ~ 30771174 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87486 | lncRNA | downstream | 291863 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87487 | lncRNA | downstream | 291863 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87488 | lncRNA | downstream | 291863 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87489 | lncRNA | downstream | 291863 | 30477403 ~ 30478234 (-) | True | G73834 |
| TU87490 | lncRNA | downstream | 291863 | 30477403 ~ 30478234 (-) | False | G73834 |
| TU87650 | lncRNA | upstream | 6585 | 30777759 ~ 30845482 (-) | True | G73974 |
| XR_003404008.2 | lncRNA | upstream | 65178 | 30836352 ~ 30838110 (-) | True | LOC113540224 |
| TU87738 | lncRNA | upstream | 259215 | 31030389 ~ 31031380 (-) | True | G74047 |
| TU87756 | lncRNA | upstream | 285311 | 31056485 ~ 31116436 (-) | True | G74060 |
| TU87963 | lncRNA | upstream | 454060 | 31225234 ~ 31226588 (-) | True | G74255 |
| XM_034303856.1 | mRNA | downstream | 19129 | 30741527 ~ 30750968 (-) | True | LOC113540055 |
| XM_026937067.2 | mRNA | downstream | 45440 | 30721032 ~ 30724657 (-) | False | LOC113540512 |
| XM_026937066.2 | mRNA | downstream | 45440 | 30721032 ~ 30724657 (-) | True | LOC113540512 |
| XM_034303822.1 | mRNA | downstream | 69052 | 30593706 ~ 30701045 (-) | True | epha4b |
| XM_026936328.2 | mRNA | downstream | 546777 | 30212389 ~ 30223320 (-) | False | acvr1l |
| XM_026937106.2 | mRNA | upstream | 2275 | 30773449 ~ 30775702 (-) | False | ccl20l |
| XM_026936925.2 | mRNA | upstream | 475886 | 31247060 ~ 31277249 (-) | True | rem2 |
| XM_034304133.1 | mRNA | upstream | 519647 | 31290821 ~ 31344984 (-) | False | carmil3 |
| XM_026937089.2 | mRNA | upstream | 519647 | 31290821 ~ 31344984 (-) | False | carmil3 |
| XM_026937088.2 | mRNA | upstream | 519647 | 31290821 ~ 31344984 (-) | True | carmil3 |
| TU87613 | other | downstream | 26271 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
| TU87233 | other | downstream | 747572 | 30019506 ~ 30022525 (-) | True | G73619 |
| XR_003403975.2 | other | downstream | 1039240 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| XR_003404065.2 | other | downstream | 1194370 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003404077.1 | other | downstream | 1245036 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| TU87656 | other | upstream | 2289 | 30773463 ~ 30775819 (-) | True | ccl20l |
| LOC113540068 | other | upstream | 1095908 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| LOC117597010 | other | upstream | 1099344 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
| TU88351 | other | upstream | 1099985 | 31871159 ~ 31871639 (-) | False | LOC117597010 |
| TU88350 | other | upstream | 1103135 | 31874309 ~ 31874827 (-) | True | G74547 |
