Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU87966 |
| length | 409 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G74256 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 31236413 ~ 31310909 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87963 | lncRNA | downstream | 9825 | 31225234 ~ 31226588 (-) | True | G74255 |
| TU87756 | lncRNA | downstream | 119977 | 31056485 ~ 31116436 (-) | True | G74060 |
| TU87738 | lncRNA | downstream | 205033 | 31030389 ~ 31031380 (-) | True | G74047 |
| TU87650 | lncRNA | downstream | 390931 | 30777759 ~ 30845482 (-) | True | G73974 |
| XR_003404008.2 | lncRNA | downstream | 398303 | 30836352 ~ 30838110 (-) | True | LOC113540224 |
| TU88199 | lncRNA | upstream | 291577 | 31567051 ~ 31650584 (-) | True | G74417 |
| TU88244 | lncRNA | upstream | 460818 | 31736292 ~ 31785757 (-) | True | G74458 |
| TU88271 | lncRNA | upstream | 468877 | 31744351 ~ 31745462 (-) | True | G74479 |
| TU88242 | lncRNA | upstream | 477647 | 31753121 ~ 31756304 (-) | True | G74457 |
| TU88243 | lncRNA | upstream | 477647 | 31753121 ~ 31756304 (-) | False | G74457 |
| XM_026937106.2 | mRNA | downstream | 460711 | 30773449 ~ 30775702 (-) | False | ccl20l |
| XM_034303856.1 | mRNA | downstream | 485445 | 30741527 ~ 30750968 (-) | True | LOC113540055 |
| XM_026937067.2 | mRNA | downstream | 511756 | 30721032 ~ 30724657 (-) | False | LOC113540512 |
| XM_026937066.2 | mRNA | downstream | 511756 | 30721032 ~ 30724657 (-) | True | LOC113540512 |
| XM_034303822.1 | mRNA | downstream | 535368 | 30593706 ~ 30701045 (-) | True | epha4b |
| XM_034304133.1 | mRNA | upstream | 15347 | 31290821 ~ 31344984 (-) | False | carmil3 |
| XM_026937089.2 | mRNA | upstream | 15347 | 31290821 ~ 31344984 (-) | False | carmil3 |
| XM_026937088.2 | mRNA | upstream | 15347 | 31290821 ~ 31344984 (-) | True | carmil3 |
| XM_026937091.2 | mRNA | upstream | 15347 | 31290821 ~ 31323220 (-) | False | carmil3 |
| XM_034303333.1 | mRNA | upstream | 78428 | 31353902 ~ 31356972 (-) | True | LOC113540523 |
| TU87656 | other | downstream | 460594 | 30773463 ~ 30775819 (-) | True | ccl20l |
| TU87613 | other | downstream | 492587 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
| TU87233 | other | downstream | 1213888 | 30019506 ~ 30022525 (-) | True | G73619 |
| XR_003403975.2 | other | downstream | 1505556 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| XR_003404065.2 | other | downstream | 1660686 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| LOC113540068 | other | upstream | 591608 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| LOC117597010 | other | upstream | 595044 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
| TU88351 | other | upstream | 595685 | 31871159 ~ 31871639 (-) | False | LOC117597010 |
| TU88350 | other | upstream | 598835 | 31874309 ~ 31874827 (-) | True | G74547 |
| TU88353 | other | upstream | 604560 | 31880034 ~ 31880556 (-) | True | G74550 |
